Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.334841	AA516637	expressed sequence AA516637	8		101955
Mm.334841	AA682107	expressed sequence AA682107	8		101973
Mm.334841	Cdh13	cadherin 13	8	8 64.0 cM	12554
Gene Ontology	calcium ion binding | cell adhesion | extracellular space | homophilic cell adhesion | membrane | plasma membrane | protein binding
Human Homolog	CDH13[cadherin 13, H-cadherin (heart)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 78 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACCCAGGCTG (3) 8.2 0.0082 P8 Cb GC CTCATCCGGC (3) 3.3 0.0033 P8 Cb GC GGTGGCTTCC (3) 1.6 0.0016 Cb medulloblastoma TGTGGGTAAT (5) 4.6 0.0046 Cb medulloblastoma ACCCAGGCTG (3) 2.3 0.0023 Cb medulloblastoma CCTGCGTCCT (3) 2.3 0.0023 Cb medulloblastoma CTCATCCGGC (3) 2.3 0.0023 Cb medulloblastoma TACACACGCA (4) 2.3 0.0023 P8 GC+1d culture ACCCAGGCTG (3) 19.4 0.0194 P8 GC+1d culture CTCATCCGGC (3) 18.3 0.0183 P8 GC+1d culture AGCAGTCGGA (3) 1.1 0.0011 P8 GC+1d culture TGTGGGTAAT (5) 1.1 0.0011 P8 GC+SHH+1d culture CTCATCCGGC (3) 8.2 0.0082 P8 GC+SHH+1d culture ACCCAGGCTG (3) 4.7 0.0047 P8 GC+SHH+1d culture TGTGGGTAAT (5) 3.5 0.0035 P8 GC+SHH+1d culture TACACACGCA (4) 1.2 0.0012 3T3 fibroblasts ACCCAGGCTG (3) 42.1 0.0421 3T3 fibroblasts CTCATCCGGC (3) 7 0.007 3T3 fibroblasts ATGGGCAGGT (4) 3.5 0.0035 3T3 fibroblasts TACACACGCA (4) 3.5 0.0035 E15 cortex ACCCAGGCTG (3) 4.9 0.0049 E15 cortex CTCATCCGGC (3) 4.9 0.0049 P1 cortex ACCCAGGCTG (3) 4.5 0.0045 P1 cortex CTCATCCGGC (3) 4.5 0.0045 P1 cortex TACACACGCA (4) 4.5 0.0045 P1 cortex TGTGGGTAAT (5) 4.5 0.0045 Hypothalamus ACCCAGGCTG (3) 9.1 0.0091 Hypothalamus CTCATCCGGC (3) 3.6 0.0036 Hypothalamus TACACACGCA (4) 3.6 0.0036 Hypothalamus TGTGGGTAAT (5) 3.6 0.0036 Hypothalamus CAAAACTCTG (4) 1.8 0.0018 E12.5 retina ACCCAGGCTG (3) 5.6 0.0056 E12.5 retina CTCATCCGGC (3) 1.9 0.0019 E14.5 retina CCTGCGTCCT (3) 7.3 0.0073 E14.5 retina GGTGGCTTCC (3) 1.8 0.0018 E14.5 retina TACACACGCA (4) 1.8 0.0018 E16.5 retina ACCCAGGCTG (3) 7.2 0.0072 E16.5 retina CCTGCGTCCT (3) 7.2 0.0072 E16.5 retina TACACACGCA (4) 3.6 0.0036 E18.5 retina ACCCAGGCTG (3) 3.6 0.0036 E18.5 retina CAAAACTCTG (4) 1.8 0.0018 E18.5 retina CCTGCGTCCT (3) 1.8 0.0018 P0.5 retina ACCCAGGCTG (3) 9.8 0.0098 P0.5 retina CTCATCCGGC (3) 7.9 0.0079 P0.5 retina AGCAGTCGGA (3) 2 0.002 P0.5 retina ATGGGCAGGT (4) 2 0.002 P0.5 retina TACACACGCA (4) 2 0.002 P2.5 retina CTCATCCGGC (3) 3.5 0.0035 P2.5 retina TGTGGGTAAT (5) 3.5 0.0035 P2.5 retina ACCCAGGCTG (3) 1.8 0.0018 P2.5 retina CAAAACTCTG (4) 1.8 0.0018 P4.5 retina ACCCAGGCTG (3) 9.9 0.0099 P4.5 retina CCTGCGTCCT (3) 7.9 0.0079 P4.5 retina TGTGGGTAAT (5) 5.9 0.0059 P4.5 retina CTCATCCGGC (3) 2 0.002 P6.5 retina ACCCAGGCTG (3) 6.7 0.0067 P6.5 retina CCTGCGTCCT (3) 1.7 0.0017 P6.5 retina GGTGGCTTCC (3) 1.7 0.0017 P6.5 retina TACACACGCA (4) 1.7 0.0017 P10.5 crx- retina ACCCAGGCTG (3) 31.6 0.0316 P10.5 crx- retina CTCATCCGGC (3) 24.2 0.0242 P10.5 crx- retina TACACACGCA (4) 5.6 0.0056 P10.5 crx- retina AGCAGTCGGA (3) 3.7 0.0037 P10.5 crx- retina ATGGGCAGGT (4) 1.9 0.0019 P10.5 crx- retina CCTGCGTCCT (3) 1.9 0.0019 P10.5 crx+ retina ACCCAGGCTG (3) 5.8 0.0058 P10.5 crx+ retina CTCATCCGGC (3) 5.8 0.0058 P10.5 crx+ retina TGTGGGTAAT (5) 5.8 0.0058 P10.5 crx+ retina CCTGCGTCCT (3) 3.8 0.0038 P10.5 crx+ retina TACACACGCA (4) 3.8 0.0038 Adult retinal ACCCAGGCTG (3) 11.1 0.0111 Adult retinal CTCATCCGGC (3) 9.3 0.0093 Adult retinal CCTGCGTCCT (3) 1.9 0.0019 Adult retinal TGTGGGTAAT (5) 1.9 0.0019 ONL CTCATCCGGC (3) 5.7 0.0057 ONL ACCCAGGCTG (3) 1.9 0.0019 ONL TACACACGCA (4) 1.9 0.0019 ONL TGTGGGTAAT (5) 1.9 0.0019