Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.34411	Pdk1	pyruvate dehydrogenase kinase, isoenzyme 1	2		228026
Gene Ontology	[pyruvate dehydrogenase (lipoamide)] kinase activity | ATP binding | extracellular space | kinase activity | mitochondrion | mitochondrion | protein-histidine kinase activity | signal transduction | transferase activity
Human Homolog	PDK1[pyruvate dehydrogenase kinase, isoenzyme 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 45 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTCCTGAGTG 3.3 0.0033 P8 Cb GC GGAGGCAGAG (2) 1.6 0.0016 Cb medulloblastoma GGAGGCAGAG (2) 2.3 0.0023 P8 GC+1d culture GGAGGCAGAG (2) 1.1 0.0011 P8 GC+SHH+1d culture CTCCTGAGTG 2.3 0.0023 3T3 fibroblasts GGAGGCAGAG (2) 3.5 0.0035 E15 cortex GAGCTAAGTC (2) 4.9 0.0049 E15 cortex GGAGGCAGAG (2) 4.9 0.0049 P1 cortex CGCAACTTGG 13.6 0.0136 P1 cortex TACGGACCCT 4.5 0.0045 Hypothalamus GGAGGCAGAG (2) 7.2 0.0072 Hypothalamus TACGGACCCT 1.8 0.0018 E12.5 retina GGAGGCAGAG (2) 3.8 0.0038 E12.5 retina TACGGACCCT 3.8 0.0038 E12.5 retina CTCCTGAGTG 1.9 0.0019 E14.5 retina GGAGGCAGAG (2) 14.6 0.0146 E14.5 retina CGCAACTTGG 1.8 0.0018 E14.5 retina GAGCTAAGTC (2) 1.8 0.0018 E16.5 retina CTCCTGAGTG 3.6 0.0036 E16.5 retina GGAGGCAGAG (2) 1.8 0.0018 E18.5 retina GGAGGCAGAG (2) 1.8 0.0018 P0.5 retina GCGGCACACA 2 0.002 P0.5 retina GGAGGCAGAG (2) 2 0.002 P2.5 retina GGAGGCAGAG (2) 7 0.007 P2.5 retina CTCCTGAGTG 5.3 0.0053 P2.5 retina TACGGACCCT 5.3 0.0053 P4.5 retina CTCCTGAGTG 5.9 0.0059 P4.5 retina GGAGGCAGAG (2) 5.9 0.0059 P4.5 retina GCGGCACACA 2 0.002 P4.5 retina TACGGACCCT 2 0.002 P6.5 retina GGAGGCAGAG (2) 5 0.005 P6.5 retina CTCCTGAGTG 3.3 0.0033 P6.5 retina GCGGCACACA 3.3 0.0033 P10.5 crx- retina CTAGGTGGTG (3) 61.3 0.0613 P10.5 crx- retina CTCCTGAGTG 1.9 0.0019 P10.5 crx+ retina GGAGGCAGAG (2) 9.6 0.0096 P10.5 crx+ retina TACGGACCCT 5.8 0.0058 P10.5 crx+ retina GAGCTAAGTC (2) 1.9 0.0019 Adult retinal GGAGGCAGAG (2) 5.6 0.0056 Adult retinal CGCAACTTGG 1.9 0.0019 Adult retinal TACGGACCCT 1.9 0.0019 ONL GGAGGCAGAG (2) 5.7 0.0057 ONL GCGGCACACA 3.8 0.0038 ONL CTCCTGAGTG 1.9 0.0019 ONL TACGGACCCT 1.9 0.0019