Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.66	Rps4x	ribosomal protein S4, X-linked	X	X 39.0 cM	20102
Gene Ontology	cell proliferation | cytosolic ribosome (sensu Eukarya) | cytosolic small ribosomal subunit (sensu Eukarya) | development | intracellular | protein biosynthesis | regulation of cell cycle | ribosome | ribosome biogenesis | RNA binding | structural constituent of ribosome
Human Homolog	RPS4X[ribosomal protein S4, X-linked]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 129 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTGAAACTAA 244.7 0.2447 P8 Cb GC GTGAAACTAC 16.3 0.0163 P8 Cb GC GTAAACTAAA 1.6 0.0016 P8 Cb GC GTCTCTCTTC (2) 1.6 0.0016 P8 Cb GC GTGAAACTGA 1.6 0.0016 P8 Cb GC GTGAAGCTAA (2) 1.6 0.0016 P8 Cb GC GTTTGTTACC 1.6 0.0016 P8 Cb GC TACAAGTTGT 1.6 0.0016 P8 Cb GC TTGAAACTAA 1.6 0.0016 Cb medulloblastoma GTGAAACTAA 71.7 0.0717 Cb medulloblastoma GTGAAACTAC 6.9 0.0069 P8 GC+1d culture GTGAAACTAA 153 0.153 P8 GC+1d culture GTGAAACTAC 5.7 0.0057 P8 GC+1d culture TACAAGTTGT 3.4 0.0034 P8 GC+1d culture GTAAACTAAA 2.3 0.0023 P8 GC+1d culture GTGGAACTAA 2.3 0.0023 P8 GC+1d culture CTGGAAAAGT 1.1 0.0011 P8 GC+1d culture GCTGCGCTAG 1.1 0.0011 P8 GC+1d culture GTGAAACTAG 1.1 0.0011 P8 GC+1d culture GTGAAACTGA 1.1 0.0011 P8 GC+1d culture TGGACAAGTG (2) 1.1 0.0011 P8 GC+1d culture TTGAAACTAA 1.1 0.0011 P8 GC+SHH+1d culture GTGAAACTAA 240 0.24 P8 GC+SHH+1d culture GTGAAACTAC 19.9 0.0199 P8 GC+SHH+1d culture GTGAAGCTAA (2) 4.7 0.0047 P8 GC+SHH+1d culture GTCTCTCTTC (2) 3.5 0.0035 P8 GC+SHH+1d culture GCTGCGCTAG 2.3 0.0023 P8 GC+SHH+1d culture GTGGAACTAA 2.3 0.0023 P8 GC+SHH+1d culture GTTTGTTACC 2.3 0.0023 P8 GC+SHH+1d culture TACAAGTTGT 2.3 0.0023 P8 GC+SHH+1d culture AACCACATCA 1.2 0.0012 P8 GC+SHH+1d culture GTAAACTAAA 1.2 0.0012 P8 GC+SHH+1d culture TTGAAACTAA 1.2 0.0012 3T3 fibroblasts GTGAAACTAA 17.5 0.0175 E15 cortex GTGAAACTAA 148.4 0.1484 P1 cortex GTGAAACTAA 54.5 0.0545 P1 cortex GCTGCGCTAG 4.5 0.0045 P1 cortex GTGAAACTAC 4.5 0.0045 P1 cortex GTGAAACTGA 4.5 0.0045 Hypothalamus GTGAAACTAA 105 0.105 Hypothalamus GTGAAACTAC 10.9 0.0109 Hypothalamus ATGCTCGTAC 3.6 0.0036 Hypothalamus GCTGCGCTAG 3.6 0.0036 Hypothalamus CAGCGATTCA 1.8 0.0018 Hypothalamus GTCTCTCTTC (2) 1.8 0.0018 Hypothalamus GTTTGTTACC 1.8 0.0018 Hypothalamus TGAAAGATGC 1.8 0.0018 E12.5 retina GTGAAACTAA 478.7 0.4787 E12.5 retina GTGAAACTAC 24.4 0.0244 E12.5 retina AACCACATCA 3.8 0.0038 E12.5 retina GTGAGACTAA 3.8 0.0038 E12.5 retina GTTTGTTACC 3.8 0.0038 E12.5 retina GCTGCGCTAG 1.9 0.0019 E12.5 retina GTGAAACTAG 1.9 0.0019 E12.5 retina GTGAAGCTAA (2) 1.9 0.0019 E12.5 retina TGAAAGATGC 1.9 0.0019 E14.5 retina GTGAAACTAA 269.7 0.2697 E14.5 retina GTGAAACTAC 12.8 0.0128 E14.5 retina AACCACATCA 9.1 0.0091 E14.5 retina GCTGCGCTAG 3.6 0.0036 E14.5 retina TACAAGTTGT 3.6 0.0036 E14.5 retina CTGGAAAAGT 1.8 0.0018 E14.5 retina GTGAAATTAA 1.8 0.0018 E14.5 retina GTGAAGCTAA (2) 1.8 0.0018 E14.5 retina GTTTGTTACC 1.8 0.0018 E14.5 retina TGAAAGATGC 1.8 0.0018 E16.5 retina GTGAAACTAA 182.9 0.1829 E16.5 retina GTGAAACTAC 14.5 0.0145 E16.5 retina GTGAAATTAA 9.1 0.0091 E16.5 retina AACCACATCA 7.2 0.0072 E16.5 retina ATGCTCGTAC 5.4 0.0054 E16.5 retina TGAAAGATGC 5.4 0.0054 E16.5 retina GTTTGTTACC 3.6 0.0036 E16.5 retina TACAAGTTGT 3.6 0.0036 E16.5 retina CAGCGATTCA 1.8 0.0018 E16.5 retina GTCTCTCTTC (2) 1.8 0.0018 E16.5 retina GTGGAACTAA 1.8 0.0018 E18.5 retina GTGAAACTAA 611.2 0.6112 E18.5 retina GTGAAACTAC 43.7 0.0437 E18.5 retina GTGAAACTAG 5.5 0.0055 E18.5 retina GTGAAATTAA 5.5 0.0055 E18.5 retina TACAAGTTGT 3.6 0.0036 E18.5 retina CAGCGATTCA 1.8 0.0018 E18.5 retina CTGGAAAAGT 1.8 0.0018 E18.5 retina GTCTCTCTTC (2) 1.8 0.0018 E18.5 retina GTGAGACTAA 1.8 0.0018 E18.5 retina GTGGAACTAA 1.8 0.0018 E18.5 retina TTGAAACTAA 1.8 0.0018 P0.5 retina GTGAAACTAA 162.9 0.1629 P0.5 retina GTGAAACTAC 5.9 0.0059 P0.5 retina GTGAGACTAA 5.9 0.0059 P0.5 retina ATGCTCGTAC 2 0.002 P0.5 retina GTGAAGCTAA (2) 2 0.002 P0.5 retina GTGGAACTAA 2 0.002 P0.5 retina GTTTGTTACC 2 0.002 P0.5 retina TACAAGTTGT 2 0.002 P2.5 retina GTGAAACTAA 225.2 0.2252 P2.5 retina GTGAAACTAC 3.5 0.0035 P2.5 retina GTGAAATTAA 3.5 0.0035 P2.5 retina TTGAAACTAA 3.5 0.0035 P2.5 retina AACCACATCA 1.8 0.0018 P2.5 retina CAGCGATTCA 1.8 0.0018 P2.5 retina CTGGAAAAGT 1.8 0.0018 P2.5 retina GTGGAACTAA 1.8 0.0018 P4.5 retina GTGAAACTAA 277.4 0.2774 P4.5 retina GTGAAACTAC 5.9 0.0059 P4.5 retina GTGGAACTAA 4 0.004 P4.5 retina TACAAGTTGT 4 0.004 P4.5 retina GTGAAATTAA 2 0.002 P4.5 retina TTGAAACTAA 2 0.002 P6.5 retina GTGAAACTAA 120 0.12 P6.5 retina GTGAAACTAC 11.7 0.0117 P6.5 retina CAGCGATTCA 1.7 0.0017 P6.5 retina GTCTCTCTTC (2) 1.7 0.0017 P6.5 retina GTGAAATTAA 1.7 0.0017 P6.5 retina GTGAGACTAA 1.7 0.0017 P10.5 crx- retina GTGAAACTAA 37.2 0.0372 P10.5 crx- retina GTGAAACTAC 3.7 0.0037 P10.5 crx- retina TACAAGTTGT 1.9 0.0019 P10.5 crx+ retina GTGAAACTAA 113.4 0.1134 P10.5 crx+ retina GTGAAACTAC 9.6 0.0096 P10.5 crx+ retina TACAAGTTGT 1.9 0.0019 Adult retinal GTGAAACTAA 53.7 0.0537 Adult retinal GTGAAACTAC 7.4 0.0074 Adult retinal TACAAGTTGT 1.9 0.0019 ONL GTGAAACTAA 21.1 0.0211 ONL AACCACATCA 1.9 0.0019 ONL GTGAAACTAC 1.9 0.0019 ONL TACAAGTTGT 1.9 0.0019