Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.788	Ly6e	lymphocyte antigen 6 complex, locus E	15	15 41.7 cM	17069
Gene Ontology	defense response | extracellular space | membrane | plasma membrane
Human Homolog	LY6E[lymphocyte antigen 6 complex, locus E]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 34 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAGGACTGCC 16.3 0.0163 P8 Cb GC GGCAGCCTCC (2) 1.6 0.0016 Cb medulloblastoma GAGGACTGCC 6.9 0.0069 Cb medulloblastoma GGCAGCCTCC (2) 2.3 0.0023 P8 GC+1d culture GAGGACTGCC 92.5 0.0925 P8 GC+1d culture CACCACCAAA (2) 2.3 0.0023 P8 GC+1d culture GGCAGCCTCC (2) 1.1 0.0011 P8 GC+1d culture TGTTCTCCAT 1.1 0.0011 P8 GC+SHH+1d culture GAGGACTGCC 62.1 0.0621 P8 GC+SHH+1d culture CACCACCAAA (2) 1.2 0.0012 P8 GC+SHH+1d culture GGCAGCCTCC (2) 1.2 0.0012 P8 GC+SHH+1d culture TGTTCTCCAT 1.2 0.0012 3T3 fibroblasts GAGGACTGCC 3.5 0.0035 E15 cortex GAGGACTGCC 4.9 0.0049 P1 cortex CACCACCAAA (2) 4.5 0.0045 Hypothalamus GAGGACTGCC 10.9 0.0109 Hypothalamus CACCACCAAA (2) 1.8 0.0018 E12.5 retina GAGGACTGCC 7.5 0.0075 E12.5 retina TGTTCTCCAT 1.9 0.0019 E14.5 retina GAGGACTGCC 3.6 0.0036 E14.5 retina GGCAGCCTCC (2) 1.8 0.0018 E16.5 retina GAGGACTGCC 3.6 0.0036 E18.5 retina CACCACCAAA (2) 3.6 0.0036 E18.5 retina GAGGACTGCC 1.8 0.0018 P0.5 retina GAGGACTGCC 3.9 0.0039 P0.5 retina CACCACCAAA (2) 2 0.002 P2.5 retina GAGGACTGCC 3.5 0.0035 P2.5 retina CACCACCAAA (2) 1.8 0.0018 P4.5 retina GAGGACTGCC 2 0.002 P6.5 retina GAGGACTGCC 6.7 0.0067 P6.5 retina CACCACCAAA (2) 1.7 0.0017 P10.5 crx- retina TGTTCTCCAT 1.9 0.0019 P10.5 crx+ retina CACCACCAAA (2) 1.9 0.0019 Adult retinal GGCAGCCTCC (2) 3.7 0.0037