Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.88216
Snrpb
small nuclear ribonucleoprotein B
2
2 73.0 cM
20638
Mm.88216
D10Mgi26
DNA Segment, Chr 10, Mouse Genome Informatics 26
10
103328
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 59 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GAGTCTCCCT
(
3
)
13.1
0.0131
P8 Cb GC
CGAGGTCTGC
(
2
)
4.9
0.0049
P8 Cb GC
AACAGCAAAA
(
2
)
3.3
0.0033
P8 Cb GC
TGGGTTTGGG
(
2
)
3.3
0.0033
Cb medulloblastoma
CCCATTGGAG
(
4
)
4.6
0.0046
Cb medulloblastoma
AACAGCAAAA
(
2
)
2.3
0.0023
Cb medulloblastoma
CGAGGTCTGC
(
2
)
2.3
0.0023
Cb medulloblastoma
GAGTCTCCCT
(
3
)
2.3
0.0023
P8 GC+1d culture
GAGTCTCCCT
(
3
)
17.1
0.0171
P8 GC+1d culture
ACGGTGGGGA
(
2
)
2.3
0.0023
P8 GC+1d culture
AAGTCTCCCT
(
2
)
1.1
0.0011
P8 GC+SHH+1d culture
GAGTCTCCCT
(
3
)
29.3
0.0293
P8 GC+SHH+1d culture
AACAGCAAAA
(
2
)
1.2
0.0012
P8 GC+SHH+1d culture
GGGGAGCCGG
(
2
)
1.2
0.0012
3T3 fibroblasts
GAGTCTCCCT
(
3
)
17.5
0.0175
3T3 fibroblasts
ACGGTGGGGA
(
2
)
7
0.007
E15 cortex
AAGTCTCCCT
(
2
)
9.9
0.0099
E15 cortex
GAGTCTCCCT
(
3
)
9.9
0.0099
E15 cortex
GGGGAGCCGG
(
2
)
9.9
0.0099
P1 cortex
GAGTCTCCCT
(
3
)
9.1
0.0091
Hypothalamus
ACGGTGGGGA
(
2
)
1.8
0.0018
Hypothalamus
CGAGGTCTGC
(
2
)
1.8
0.0018
Hypothalamus
GAGTCTCCCT
(
3
)
1.8
0.0018
E12.5 retina
GAGTCTCCCT
(
3
)
45.1
0.0451
E12.5 retina
AACTGCATAA
(
2
)
1.9
0.0019
E12.5 retina
ACGGTGGGGA
(
2
)
1.9
0.0019
E14.5 retina
GAGTCTCCCT
(
3
)
40.1
0.0401
E14.5 retina
AACTGCATAA
(
2
)
3.6
0.0036
E14.5 retina
ACGGTGGGGA
(
2
)
3.6
0.0036
E14.5 retina
AACAGCAAAA
(
2
)
1.8
0.0018
E14.5 retina
CCCATTGGAG
(
4
)
1.8
0.0018
E16.5 retina
GAGTCTCCCT
(
3
)
68.8
0.0688
E16.5 retina
AACTGCATAA
(
2
)
1.8
0.0018
E16.5 retina
ACGGTGGGGA
(
2
)
1.8
0.0018
E18.5 retina
GAGTCTCCCT
(
3
)
29.1
0.0291
E18.5 retina
TGGGTTTGGG
(
2
)
3.6
0.0036
E18.5 retina
ACGGTGGGGA
(
2
)
1.8
0.0018
E18.5 retina
CGAGGTCTGC
(
2
)
1.8
0.0018
P0.5 retina
GAGTCTCCCT
(
3
)
62.8
0.0628
P0.5 retina
CCCACGAGGT
(
2
)
5.9
0.0059
P0.5 retina
CGAGGTCTGC
(
2
)
3.9
0.0039
P0.5 retina
ACGGTGGGGA
(
2
)
2
0.002
P0.5 retina
TGGGTTTGGG
(
2
)
2
0.002
P2.5 retina
GAGTCTCCCT
(
3
)
28.2
0.0282
P2.5 retina
ACGGTGGGGA
(
2
)
3.5
0.0035
P2.5 retina
AACTGCATAA
(
2
)
1.8
0.0018
P4.5 retina
GAGTCTCCCT
(
3
)
27.7
0.0277
P4.5 retina
GGGGAGCCGG
(
2
)
2
0.002
P6.5 retina
GAGTCTCCCT
(
3
)
20
0.02
P6.5 retina
ACGGTGGGGA
(
2
)
1.7
0.0017
P6.5 retina
CCCACGAGGT
(
2
)
1.7
0.0017
P10.5 crx- retina
GAGTCTCCCT
(
3
)
20.4
0.0204
P10.5 crx+ retina
GAGTCTCCCT
(
3
)
5.8
0.0058
P10.5 crx+ retina
ACGGTGGGGA
(
2
)
3.8
0.0038
P10.5 crx+ retina
TGGGTTTGGG
(
2
)
1.9
0.0019
Adult retinal
GAGTCTCCCT
(
3
)
22.2
0.0222
Adult retinal
ACGGTGGGGA
(
2
)
1.9
0.0019
ONL
GAGTCTCCCT
(
3
)
19.2
0.0192
ONL
TGGGTTTGGG
(
2
)
1.9
0.0019
