Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.153911	Lcp1	lymphocyte cytosolic protein 1	14	14 42.0 cM	18826
Gene Ontology	actin binding | calcium ion binding
Human Homolog	LCP1[lymphocyte cytosolic protein 1 (L-plastin)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 90 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACCAATTTGG GCCTTAAAAA GCCTTAAAAC TTAAAAAAAA (2) TTAAAAAAAT (2) 21.2 0.0212 Cb medulloblastoma ACTTGAAAAA CTCCCGCTCT GGGGGAGGGG (4) TTAAAAAAAA (2) 60.1 0.0601 P8 GC+1d culture ACTTGAAAAA CTCCCGCTCT GCTTAAAAGA (2) GGGGGAGGGG (4) TTAAAAAAAA (2) 34.1 0.0341 P8 GC+SHH+1d culture CTCCCGCTCT TTAAAAAAAA (2) TTAAAAAAAT (2) TTGGCGAAGA 38.7 0.0387 3T3 fibroblasts CTCCCGCTCT GGGGGAGGGG (4) 7 0.007 E15 cortex CTGTAGGCGA GCTGCCCAGG (3) TTAAAAAAAA (2) 14.7 0.0147 P1 cortex CTCCCGCTCT CTGCACAGGG GGGGGAGGGG (4) TTAAAAAAAA (2) 27.1 0.0271 Hypothalamus CCTTCCCCCA CTCCCGCTCT GATTAAAAAG (4) GCCTTAAAAA TTAAAAAAAA (2) TTGGCGAAGA 32.5 0.0325 E12.5 retina ACCAATTTGG GGGGGAGGGG (4) TTAAAAAAAA (2) 18.9 0.0189 E14.5 retina GCCTTAAAAC TTAAAAAAAA (2) 18.2 0.0182 E16.5 retina ATTTATTTTA (2) CCTTCCCCCA GCTGCCCAGG (3) TTAAAAAAAA (2) 23.5 0.0235 E18.5 retina ACTTGAAAAA GCCTTAAAAA GGGGGAGGGG (4) TTAAAAAAAA (2) TTAAAAAAAT (2) TTGGCGAAGA 59.9 0.0599 P0.5 retina ACTTGAAAAA CTCCCGCTCT CTGCACAGGG CTGTAGGCGA TTAAAAAAAA (2) 29.5 0.0295 P2.5 retina GCCTTAAAAA GCTTAAAAGA (2) GGGGGAGGGG (4) TTAAAAAAAA (2) 45.9 0.0459 P4.5 retina ACCAATTTGG CTGCACAGGG GCTTAAAAGA (2) TTAAAAAAAA (2) 55.6 0.0556 P6.5 retina ACCAATTTGG ATTTATTTTA (2) CTCCCGCTCT GCCTTAAAAA GCTTAAAAGA (2) GGGGGAGGGG (4) TTAAAAAAAA (2) 28.5 0.0285 P10.5 crx- retina ACCAATTTGG ATTTATTTTA (2) GCTGCCCAGG (3) GCTTAAAAGA (2) GGGGGAGGGG (4) TTAAAAAAAA (2) 29.9 0.0299 P10.5 crx+ retina ACTTGAAAAA ATTTATTTTA (2) GGGGGAGGGG (4) TTAAAAAAAA (2) 11.5 0.0115 Adult retinal ACCAATTTGG CTCCCGCTCT GATTAAAAAG (4) GCTGCCCAGG (3) GCTTAAAAGA (2) GGGGGAGGGG (4) TTAAAAAAAA (2) 24.3 0.0243 ONL ACTTGAAAAA CTCCCGCTCT GATTAAAAAG (4) GCTTAAAAGA (2) TTAAAAAAAA (2) 22.9 0.0229