Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.158264	Pfdn5	prefoldin 5	15	15 61.7 cM	56612
Mm.158264	1700010A06Rik	RIKEN cDNA 1700010A06 gene	15		69335
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 119 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGCAGGCTG (2) CAGGTGAGCG GAAATGATGA (2) GCCTCCTGGG (4) GGGAGAGAGT GGGGCAGCCC (2) TTTTTTTTTT (2) 94.6 0.0946 Cb medulloblastoma CAGGTGAGCG CTCCACATCG (2) GAAATGATGA (2) TGCTTATTGA (2) TTTTTTTTTT (2) 27.7 0.0277 P8 GC+1d culture CAGGTGAGCG GAAATGATGA (2) GCCTCCTGGG (4) GGGAGAGAGT GGGGCAGCCC (2) TTTTTTTTTT (2) 106.2 0.1062 P8 GC+SHH+1d culture CAGGTGAGCG CTCCACATCG (2) GAAATGATGA (2) GCCTCCTGGG (4) GGGGCAGCCC (2) TTTTTTTTTT (2) 73.9 0.0739 3T3 fibroblasts CAGGTGAGCG GAAATGATGA (2) GCCTCCTGGG (4) GGGGCAGCCC (2) 56.1 0.0561 E15 cortex CAGGTGAGCG GAAATGAAGA GAAATGATGA (2) GCCTCCTGGG (4) GGGGCAGCCC (2) TTTTTTTTTT (2) 74 0.074 P1 cortex CAGGTGAGCG GAAATGAAGA GAAATGATGA (2) GGGGCAGCCC (2) TTTTTTTTTT (2) 40.8 0.0408 Hypothalamus CAGGTGAGCG CTCCACATCG (2) GAAATGATGA (2) GGGAGAGAGT GGGGCAGCCC (2) TTTTTTTTTT (2) 56.1 0.0561 E12.5 retina CAGGTGAGCG GAAATGAAGA GAAATGATGA (2) GCCTCCTGGG (4) TTTTTTTTTT (2) 78.9 0.0789 E14.5 retina AAACAAGCTG (2) CAGGTGAGCG CTCCACATCG (2) GCCTCCTGGG (4) GGGAGAGAGT GGGGCAGCCC (2) TTTTTTTTTT (2) 61.8 0.0618 E16.5 retina CAGGTGAGCG CTCCACATCG (2) GAAATGATGA (2) GCCTCCTGGG (4) GGGAGAGAGT GGGGCAGCCC (2) TGCTTATTGA (2) TTTTTTTTTT (2) 56 0.056 E18.5 retina CAGGTGAGCG GAAATGATGA (2) GGGAGAGAGT GGGGCAGCCC (2) TTTTTTTTTT (2) 40 0.04 P0.5 retina AAACAAGCTG (2) CAGGTGAGCG CTCCACATCG (2) GAAATGATGA (2) GCCTCCTGGG (4) GGGGCAGCCC (2) TTTTTTTTTT (2) 94.3 0.0943 P2.5 retina CAGGTGAGCG GAAATGATGA (2) GCCTCCTGGG (4) GGGAGAGAGT GGGGCAGCCC (2) TTTTTTTTTT (2) 38.8 0.0388 P4.5 retina CAGGTGAGCG GAAATGATGA (2) GGGAGAGAGT GGGGCAGCCC (2) TTTTTTTTTT (2) 47.6 0.0476 P6.5 retina CAGGTGAGCG GAAATGATGA (2) GCCTCCTGGG (4) GGGAGAGAGT GGGGCAGCCC (2) TTTTTTTTTT (2) 51.6 0.0516 P10.5 crx- retina CAGGTGAGCG GAAATGATGA (2) GCCTCCTGGG (4) GGGGCAGCCC (2) TGCTTATTGA (2) 113.3 0.1133 P10.5 crx+ retina CAGGTGAGCG CTCCACATCG (2) GAAATGAAGA GAAATGATGA (2) GCCTCCTGGG (4) GGGGCAGCCC (2) TTTTTTTTTT (2) 48 0.048 Adult retinal AAACAAGCTG (2) CAGGTGAGCG GAAATGATGA (2) GCCTCCTGGG (4) GGGGCAGCCC (2) TGCTTATTGA (2) TTTTTTTTTT (2) 57.6 0.0576 ONL AAACAAGCTG (2) AAGCAGGCTG (2) CAGGTGAGCG GAAATGATGA (2) GCCTCCTGGG (4) TTTTTTTTTT (2) 47.8 0.0478