| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAAAAAAAAA (2) ATTTGTATCT CCACCTCGTG (2) GTCCTCCTCC TGAATTTCTG (2)
| 215.2 | 0.2152 |
| Cb medulloblastoma | AAAAAAAAAA (2) ATTTGTATCT TAAAAACAGG (3)
| 802.4 | 0.8024 |
| P8 GC+1d culture | AAAAAAAAAA (2) ACAAGGCTGC ATTTAACTCC (3) ATTTGTATCT GTTGGTGCTA TAAAAACAGG (3)
| 224.8 | 0.2248 |
| P8 GC+SHH+1d culture | AAAAAAAAAA (2) ACAAGGCTGC ATTTGTATCT GTTGGTGCTA TGAATTTCTG (2)
| 290.5 | 0.2905 |
| 3T3 fibroblasts | AAAAAAAAAA (2) CCACCTCGTG (2) GTCATAGCTG (2) GTTGGTGCTA TGAATTTCTG (2)
| 49 | 0.049 |
| E15 cortex | AAAAAAAAAA (2) AAAAGGGCAG (3) ATTTAACTCC (3) GTCATAGCTG (2)
| 227.5 | 0.2275 |
| P1 cortex | AAAAAAAAAA (2) ATTTGTATCT CCACCTCGTG (2)
| 259 | 0.259 |
| Hypothalamus | AAAAAAAAAA (2) ACAAGGCTGC ATTTGTATCT CTTATGTTCA (5)
| 128.6 | 0.1286 |
| E12.5 retina | AAAAAAAAAA (2) ACAAGGCTGC ATTTGTATCT GTCCTCCTCC TAAAAACAGG (3) TGCTTCAGAA
| 150.3 | 0.1503 |
| E14.5 retina | AAAAAAAAAA (2) AAAAGGGCAG (3) ACAAGGCTGC ACTTGGGTGT (3) ATTTAACTCC (3) ATTTGTATCT CCACCTCGTG (2) GTCCTCCTCC
| 116.4 | 0.1164 |
| E16.5 retina | AAAAAAAAAA (2) ACAAGGCTGC ATTTGTATCT GTCCTCCTCC GTTGGTGCTA
| 63.4 | 0.0634 |
| E18.5 retina | AAAAAAAAAA (2) ATTTGTATCT CTTATGTTCA (5)
| 389.2 | 0.3892 |
| P0.5 retina | AAAAAAAAAA (2) AAAAGGGCAG (3) ACTTGGGTGT (3) ATTTAACTCC (3) ATTTGTATCT GTCATAGCTG (2)
| 137.5 | 0.1375 |
| P2.5 retina | AAAAAAAAAA (2) ACAAGGCTGC ATTTGTATCT GTCATAGCTG (2) GTTGGTGCTA
| 346.8 | 0.3468 |
| P4.5 retina | AAAAAAAAAA (2) ACTTGGGTGT (3) ATTTGTATCT CTTATGTTCA (5) GTCATAGCTG (2) TGCTTCAGAA
| 301.2 | 0.3012 |
| P6.5 retina | AAAAAAAAAA (2) AAATACCTGA ACAAGGCTGC ACTTGGGTGT (3) ATTTGTATCT GTCATAGCTG (2)
| 285.1 | 0.2851 |
| P10.5 crx- retina | AAAAAAAAAA (2) AAATACCTGA ACTTGGGTGT (3) ATTTAACTCC (3) ATTTGTATCT CTTATGTTCA (5) GTTGGTGCTA TGAATTTCTG (2)
| 113.4 | 0.1134 |
| P10.5 crx+ retina | AAAAAAAAAA (2) AAATACCTGA ATTTGTATCT CTTATGTTCA (5)
| 128.7 | 0.1287 |
| Adult retinal | AAAAAAAAAA (2) AAATACCTGA ACAAGGCTGC ATTTGTATCT GTCATAGCTG (2) TGAATTTCTG (2)
| 74.2 | 0.0742 |
| ONL | AAAAAAAAAA (2) AAATACCTGA ATTTGTATCT GTCATAGCTG (2) TGCTTCAGAA
| 128.2 | 0.1282 |