Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.180003	Rps27a	ribosomal protein S27a	9		78294
Gene Ontology	intracellular | nucleus | protein biosynthesis | ribosome | structural constituent of ribosome
Human Homolog	RPS27A[ribosomal protein S27a]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 94 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAACTCCAG AACTAAAAAA (2) ACGGGAAAAA (2) GAAAGCCACT GAAGCCACTT (2) GGAAGCACTT GGAAGCCACT GGAAGCCCCT (2) 375.1 0.3751 Cb medulloblastoma AAAACTCCAG AACTAAAAAA (2) ACGGGAAAAA (2) GGAAGCCACT 187.2 0.1872 P8 GC+1d culture AAAACTCCAG AACTAAAAAA (2) ACGGGAAAAA (2) AGAGCTTTAA GAAAGCCACT GAAGCCACTT (2) GGAAGCCACT 181.4 0.1814 P8 GC+SHH+1d culture AACTAAAAAA (2) ACGGGAAAAA (2) AGAGCTTTAA GAAAGCCACT GAAGCCACTT (2) GGAAGCCACT 251.7 0.2517 3T3 fibroblasts AAAACTCCAG GGAAGCCACT 147.2 0.1472 E15 cortex GGAAGCCACT 148.4 0.1484 P1 cortex AAAACTCCAG ACGGGAAAAA (2) AGAGCTTTAA GAAAGCCACT GGAAGCCACT GGAAGCCCCT (2) 77.2 0.0772 Hypothalamus AAAACTCCAG ACGGGAAAAA (2) GAAGCCACTT (2) GGAAGCACTT GGAAGCCACT 164.7 0.1647 E12.5 retina AAAACTCCAG ACGGGAAAAA (2) GAAGCCACTT (2) GGAAGCCACT GGAAGCCCCT (2) GGGAAGCCAC 293 0.293 E14.5 retina AAAACTCCAG AACTAAAAAA (2) ACGGGAAAAA (2) GGAAGCCACT 180.3 0.1803 E16.5 retina AAAACTCCAG GGAAGCCACT GGAAGCCCCT (2) 226.4 0.2264 E18.5 retina AAAACTCCAG AACTAAAAAA (2) ACGGGAAAAA (2) AGAGCTTTAA GAAGCCACTT (2) GGAAGCCACT GGAAGCCCCT (2) GGGAAGCCAC 280.1 0.2801 P0.5 retina ACGGGAAAAA (2) GAAGCCACTT (2) GGAAGCCACT 233.6 0.2336 P2.5 retina AAAACTCCAG ACGGGAAAAA (2) AGAGCTTTAA GGAAGCCACT GGGAAGCCAC 223.5 0.2235 P4.5 retina AAAACTCCAG AACTAAAAAA (2) ACGGGAAAAA (2) GAAGCCACTT (2) GGAAGCCACT GGAAGCCCCT (2) 188.3 0.1883 P6.5 retina ACGGGAAAAA (2) AGAGCTTTAA GAAAGCCACT GGAAGCCACT 95 0.095 P10.5 crx- retina AAAACTCCAG ACGGGAAAAA (2) GGAAGCCACT GGAAGCCCCT (2) GGGAAGCCAC 195.1 0.1951 P10.5 crx+ retina AACTAAAAAA (2) ACGGGAAAAA (2) GAAGCCACTT (2) GGAAGCCACT GGGAAGCCAC 146.1 0.1461 Adult retinal GGAAGCCACT GGAAGCCCCT (2) 98.2 0.0982 ONL AACTAAAAAA (2) ACGGGAAAAA (2) GGAAGCACTT GGAAGCCACT 70.8 0.0708