Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.196239	Map1lc3a	microtubule-associated protein 1 light chain 3 alpha	2		66734
Human Homolog	MAP1LC3A[microtubule-associated protein 1 light chain 3 alpha]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 42 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGCGAGTTGG GTCTACGCCT GTGAGCGTCT TTCGGGTTGC 14.7 0.0147 Cb medulloblastoma AGCGAGTTGG GTGAGCGTCT TTCGGGTTGC 9.2 0.0092 P8 GC+1d culture GTCTACGCCT TTCGGGTTGC 46.8 0.0468 P8 GC+SHH+1d culture TTCGGGTTGC 19.9 0.0199 3T3 fibroblasts GTCTACGCCT TTCGGGTTGC 14 0.014 E15 cortex CTGGAAAAAA GAGAGGGCTT 9.8 0.0098 P1 cortex GTCTACGCCT TCTTCATCCT (2) TTCGGGTTGC 36.3 0.0363 Hypothalamus AGCGAGTTGG GAGAGGGCTT GTCTACGCCT TTCGGGTTGC 32.5 0.0325 E12.5 retina CTGGAAAAAA TTCGGGTTGC 11.3 0.0113 E14.5 retina TCTTCATCCT (2) TTCGGGTTGC 14.6 0.0146 E16.5 retina TTCGGGTTGC 12.7 0.0127 E18.5 retina CTGGAAAAAA TTCGGGTTGC 5.4 0.0054 P0.5 retina CTGGAAAAAA TTCGGGTTGC 19.7 0.0197 P2.5 retina TTCGGGTTGC 17.6 0.0176 P4.5 retina CTGGAAAAAA TTCGGGTTGC 11.9 0.0119 P6.5 retina TTCGGGTTGC 28.3 0.0283 P10.5 crx- retina GTCTACGCCT TTCGGGTTGC 27.9 0.0279 P10.5 crx+ retina GTCTACGCCT TTCGGGTTGC 11.5 0.0115 Adult retinal TTCGGGTTGC 14.8 0.0148 ONL CTGGAAAAAA GAGAGGGCTT TTCGGGTTGC 7.6 0.0076