Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.197555	Ddx48	DEAD (Asp-Glu-Ala-Asp) box polypeptide 48	11		192170
Gene Ontology	ATP binding | ATP dependent helicase activity | DNA binding | helicase activity | hydrolase activity | nucleic acid binding | nucleus | protein biosynthesis | RNA binding | rRNA processing | translation initiation factor activity
Human Homolog	DDX48[DEAD (Asp-Glu-Ala-Asp) box polypeptide 48]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 61 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AATGTGGCTG (2) GCTGGATAGG (2) TACATAATCC 21.3 0.0213 Cb medulloblastoma AATGTGGCTG (2) GCTGGATAGG (2) GGCATCTTGT TACATAATCC 20.7 0.0207 P8 GC+1d culture AATGTGGCTG (2) TACATAATCC 22.8 0.0228 P8 GC+SHH+1d culture AATGTGGCTG (2) GCTGGATAGG (2) GGCATCTCGT TACATAATCC 21.1 0.0211 3T3 fibroblasts AATGTGGCTG (2) GTCATAGCTG (2) TACATAATCC 21 0.021 E15 cortex AATGTGGCTG (2) GTCATAGCTG (2) TACATAATCC 29.6 0.0296 P1 cortex AATGTGGCTG (2) 4.5 0.0045 Hypothalamus AATGTGGCTG (2) GCTGGATAGG (2) GGCATCTTGT TACATAATCC 18.1 0.0181 E12.5 retina AATGTGGCTG (2) GCTGGATAGG (2) TACATAATCC 24.4 0.0244 E14.5 retina GGCATCTCGT TACATAATCC 23.7 0.0237 E16.5 retina AATGTGGCTG (2) TACATAATCC 27.1 0.0271 E18.5 retina GGCATCTCGT GGCATCTTGT TACATAATCC 38.2 0.0382 P0.5 retina AATGTGGCTG (2) GCTGGATAGG (2) GTCATAGCTG (2) TACATAATCC 25.5 0.0255 P2.5 retina AATGTGGCTG (2) GTCATAGCTG (2) TACATAATCC 24.7 0.0247 P4.5 retina GGCATCTTGT GTCATAGCTG (2) TACATAATCC 29.8 0.0298 P6.5 retina GCTGGATAGG (2) GTCATAGCTG (2) TACATAATCC 21.6 0.0216 P10.5 crx- retina AATGTGGCTG (2) GCTGGATAGG (2) GGCATCTTGT TACATAATCC 31.6 0.0316 P10.5 crx+ retina GGCATCTTGT TACATAATCC 15.4 0.0154 Adult retinal AATGTGGCTG (2) GGCATCTCGT GGCATCTTGT GTCATAGCTG (2) TACATAATCC 16.8 0.0168 ONL GGCATCTTGT GTCATAGCTG (2) TACATAATCC 22.9 0.0229