Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.2018	AI225912	expressed sequence AI225912	8		102015
Mm.2018	Cbfb	core binding factor beta	8	8 51.0 cM	12400
Gene Ontology	lymphocyte differentiation | myeloid blood cell differentiation | nucleus | ossification | positive regulation of transcription from Pol II promoter | protein binding | transcription coactivator activity
Human Homolog	CBFB[core-binding factor, beta subunit]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 48 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGTTTGGGTA (2) GACAGTAATA GTGTTAATGT (2) TCATTTAGAA (3) 13 0.013 Cb medulloblastoma GACAGTAATA 6.9 0.0069 P8 GC+1d culture GACAGTAATA GTGTTAATGT (2) TGATCTTACT (2) 6.9 0.0069 P8 GC+SHH+1d culture GACAGTAATA GAGGCCAGAA 11.7 0.0117 3T3 fibroblasts GTCATAGCTG (2) 10.5 0.0105 E15 cortex GTCATAGCTG (2) 4.9 0.0049 P1 cortex GACAGTAATA 13.6 0.0136 Hypothalamus GACAGTAATA 5.4 0.0054 E12.5 retina AGTTTGGGTA (2) GACAGTAATA GAGGCCAGAA TGATCTTACT (2) 20.7 0.0207 E14.5 retina GACAGTAATA GAGGCCAGAA 9.1 0.0091 E16.5 retina GACAGTAATA GAGGCCAGAA 10.8 0.0108 E18.5 retina AGTTTGGGTA (2) GACAGTAATA GTGTTAATGT (2) 21.8 0.0218 P0.5 retina GTCATAGCTG (2) 3.9 0.0039 P2.5 retina GACAGTAATA GAGGCCAGAA GTCATAGCTG (2) 24.7 0.0247 P4.5 retina GACAGTAATA GAGGCCAGAA GTCATAGCTG (2) 21.8 0.0218 P6.5 retina GACAGTAATA GAGGCCAGAA GTCATAGCTG (2) TGATCTTACT (2) 34.9 0.0349 P10.5 crx- retina GACAGTAATA GAGGCCAGAA TCATTTAGAA (3) 16.7 0.0167 P10.5 crx+ retina GACAGTAATA TCATTTAGAA (3) 11.5 0.0115 Adult retinal GACAGTAATA GAGGCCAGAA GTCATAGCTG (2) 18.6 0.0186 ONL AGTTTGGGTA (2) GACAGTAATA GAGGCCAGAA GTCATAGCTG (2) 13.3 0.0133