Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.21938	Rps20	ribosomal protein S20	4		67427
Gene Ontology	cytosolic small ribosomal subunit (sensu Eukarya) | intracellular | protein biosynthesis | ribosome | RNA binding | small ribosomal subunit | structural constituent of ribosome
Human Homolog	RPS20[ribosomal protein S20]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 122 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTACCAAAA CCTACCAAGA CCTTCCTAGA CGCACCGGTC GCATTTAAAA GCATTTAAAG GGCATTTTAA TAGGTGCTGG 115.9 0.1159 Cb medulloblastoma CCTACCAAGA CCTTCCAAAA CGCACCGGTC GAATTTAAAG (2) GCATTTAAAA GGCATTTTAA GGGCCAATAA 43.8 0.0438 P8 GC+1d culture CCTACCAAGA CGCACCGGTC GCTGAGGGGC (2) GGCATTTTAA TAGGTGCTGG 71.9 0.0719 P8 GC+SHH+1d culture ACTAGTGCTT (4) CACAGTGTGC CCTACCAAAA CCTACCAAGA CCTTCCTAGA CGCACCGGTC GCTGAGGCGC GCTGAGGGGC (2) GGCATTTTAA GGGCCAATAA TGTTCAACTG 82.1 0.0821 3T3 fibroblasts CACAGTGTGC CCTACCAAGA GCTGAGGCGC GTCATAGCTG (2) 252.3 0.2523 E15 cortex CCTACCAAGA GTCATAGCTG (2) 59.3 0.0593 P1 cortex CCTACCAAGA GCTGAGGCGC GGCATTTTAA 63.6 0.0636 Hypothalamus CCTACCAAGA CGCACCGGTC GAATTTAAAA GCATTTAAAG GCTGAGGCGC GGCATTTTAA TAGGTGCTGG 36.1 0.0361 E12.5 retina ACTAGTGCTT (4) CCTACCAAGA CGCACCGGTC GCATTTAAAA GCATTTAAAG GCTGAGGCGC GGCATTTTAA TAGGTGCTGG 148.5 0.1485 E14.5 retina CCTACCAAGA CGCACCGGTC GGCATTTTAA TAGGTGCTGG TGTTCAACTG 38.3 0.0383 E16.5 retina CCTACCAAAA CCTACCAAGA CGCACCGGTC GGCATTTTAA TAGGTGCTGG 54.3 0.0543 E18.5 retina CCTACCAAAA CCTACCAAGA CGCACCGGTC GAATTTAAAA GGCATTTTAA TAGGTGCTGG 61.8 0.0618 P0.5 retina CCTACCAAGA CGCACCGGTC GCTGAGGCGC GGCATTTTAA GTCATAGCTG (2) TAGGTGCTGG 143.2 0.1432 P2.5 retina CCTACCAAGA CCTTCCAAAA CGCACCGGTC GGCATTTTAA GTCATAGCTG (2) TAGGTGCTGG TGTTCAACTG 52.9 0.0529 P4.5 retina ACTAGTGCTT (4) CCTACCAAGA CCTTCCAAAA GAATTTAAAA GCATTTAAAA GGCATTTTAA GTCATAGCTG (2) TAGGTGCTGG 51.6 0.0516 P6.5 retina CCTACCAAGA CGCACCGGTC GAATTTAAAA GCAGATGGCT GCTGAGGCGC GGCATTTTAA GTCATAGCTG (2) TAGGTGCTGG 43.4 0.0434 P10.5 crx- retina CCTACCAAGA CGCACCGGTC GAATTTAAAA GGCATTTTAA 104.1 0.1041 P10.5 crx+ retina CCTACCAAGA CGCACCGGTC GCTGAGGGGC (2) GGCATTTTAA TAGGTGCTGG 40.3 0.0403 Adult retinal ATGAACACTG (9) CCTACCAAGA GAATTTAAAG (2) GGCATTTTAA GTCATAGCTG (2) TAGGTGCTGG 48.3 0.0483 ONL ATGAACACTG (9) CCTACCAAGA GCAGATGGCT GCATTTAAAG GGCATTTTAA GTCATAGCTG (2) TAGGTGCTGG 63 0.063