Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.220333	Nfkbib	nuclear factor of kappa light chain gene enhancer in B-cells inhibitor, beta	7		18036
Gene Ontology	nucleus
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 121 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTCCTCCCA (2) GCCTCCTCCC (2) GCTCCTCCCA (3) GGGCCCCTGA TGCTGGGAAG (5) TGCTGGGATG 39.2 0.0392 Cb medulloblastoma GCCTCCTCCC (2) GCTCCTCCCA (3) GGGCCCCTGA TGCTGGGAAA TGCTGGGAAG (5) TGCTGGGATG 71.6 0.0716 P8 GC+1d culture CCTCCTCCCA (2) GCCTCCTCCC (2) GCTCCTCCCA (3) GGGCCCCTGA TGCTGGGAAG (5) TGCTGGGATG 72.9 0.0729 P8 GC+SHH+1d culture GACCTTCTGG (2) GCCTCCTCCC (2) GGGCCCCTGA TGCTGGGAAG (5) TGCTGGGATG 80.8 0.0808 3T3 fibroblasts CCTCCTCCCA (2) GCCTCCTCCC (2) GTCATAGCTG (2) TGCTGGGATG 52.5 0.0525 E15 cortex GACCTTCTGG (2) GCCTCCTCCC (2) GCTCCTCCCA (3) GGGCCCCTGA GTCATAGCTG (2) TGCTGGGAAG (5) TGCTGGGATG 103.8 0.1038 P1 cortex GCCTCCTCCC (2) GGGCCCCTGA TGCTGGGAAG (5) TGCTGGGATG 36.2 0.0362 Hypothalamus GCCCTCCTCC (2) GCCTCCTCCC (2) GCTCCTCCCA (3) GGGCCCCTGA TGCTGGGAAA TGCTGGGAAG (5) TGCTGGGATG TGCTGGGGAT (2) 99.5 0.0995 E12.5 retina GCCTCATCCC (2) GCCTCCTCCC (2) GGGCCCCTGA TGCTGGGATG 82.6 0.0826 E14.5 retina CCTCCTCCCA (2) GACCTTCTGG (2) GCCTCATCCC (2) GCCTCCTCCC (2) GCTCCTCCCA (3) TGCTGGGATG TGCTGGGGAT (2) 122 0.122 E16.5 retina GCCCTCCTCC (2) GCCTCCTCCC (2) GCTCCTCCCA (3) GGGCCCCTGA TGCTGGGAAG (5) TGCTGGGATG TGCTGGGGAT (2) 119.5 0.1195 E18.5 retina GCCTCCTCCC (2) TGCTGGGAAA TGCTGGGAAG (5) TGCTGGGATG 114.6 0.1146 P0.5 retina GCCTCCTCCC (2) GCTCCTCCCA (3) GGGCCCCTGA GTCATAGCTG (2) TGCTGGGAAG (5) TGCTGGGATG 68.8 0.0688 P2.5 retina AGCCCTTCCT AGGACTTTAA CCCCTGCTGC (2) GCCTCCCCCC GCCTCCTCCC (2) GTCATAGCTG (2) TGCTGGGAAG (5) TGCTGGGATG TGCTGGGGAT (2) 72.4 0.0724 P4.5 retina CCCCTGCTGC (2) GCCTCCTCCC (2) GCTCCTCCCA (3) GTCATAGCTG (2) TGCTGGGAAG (5) TGCTGGGATG 97.1 0.0971 P6.5 retina GCCTCCCCCC GCCTCCTCCC (2) GCTCCTCCCA (3) GGGCCCCTGA GTCATAGCTG (2) TGCTGGGAAA TGCTGGGAAG (5) TGCTGGGATG 63.4 0.0634 P10.5 crx- retina GCCTCCTCCC (2) GCTCCTCCCA (3) GGGCCCCTGA TGCTGGGAAG (5) TGCTGGGATG 53.9 0.0539 P10.5 crx+ retina AGCCCTTCCT AGGACTTTAA GCCTCATCCC (2) GCCTCCTCCC (2) GCTCCTCCCA (3) TGCTGGGAAG (5) TGCTGGGATG 67.1 0.0671 Adult retinal AGCCCTTCCT GACCTTCTGG (2) GCCCTCCTCC (2) GCCTCCTCCC (2) GGGCCCCTGA GTCATAGCTG (2) TGCTGGGAAG (5) TGCTGGGATG 65.1 0.0651 ONL GCCTCCTCCC (2) GTCATAGCTG (2) TGCTGGGAAG (5) TGCTGGGATG 28.7 0.0287