| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AACATATGGT ATAAAGTAAC ATTTAATGAA (2) TATCAAGATT
| 16.4 | 0.0164 |
| Cb medulloblastoma | AAGAAGAAAA (2) ATAAAGTAAC ATTTAATGAA (2) GACAGGGGAA GTAAAATAAG TATCAAGATT TATTTCCTCC
| 20.7 | 0.0207 |
| P8 GC+1d culture | AAGAAGAAAA (2) ATAAAGTAAC GACAGGGGAA TATCAAGATT TTTAAAGAGA (2)
| 14.8 | 0.0148 |
| P8 GC+SHH+1d culture | ATAAAGTAAC ATTTAATGAA (2) GACAGGGGAA TATCAAGATT TTTAAAGAGA (2)
| 13 | 0.013 |
| 3T3 fibroblasts | GTCATAGCTG (2)
| 10.5 | 0.0105 |
| E15 cortex | GTCATAGCTG (2)
| 4.9 | 0.0049 |
| P1 cortex | GTAAAATAAG TATCAAGATT TTTAAAGAGA (2)
| 13.5 | 0.0135 |
| Hypothalamus | ACAGAAAGTG (3) ATAAAGTAAC ATTTAATGAA (2) GACAGGGGAA TATCAAGATT TATTTCCTCC
| 21.7 | 0.0217 |
| E12.5 retina | ATAAAGTAAC GACAGGGGAA TATCAAGATT
| 24.5 | 0.0245 |
| E14.5 retina | ATAAAGTAAC ATTTAATGAA (2) GACAGGGGAA GTAAAATAAG TATCAAGATT
| 30.9 | 0.0309 |
| E16.5 retina | AAGAAGAAAA (2) ATAAAGTAAC ATTTAATGAA (2) CTCCGCCAGG TATCAAGATT
| 23.6 | 0.0236 |
| E18.5 retina | ATAAAGTAAC TATCAAGATT
| 20 | 0.02 |
| P0.5 retina | ATAAAGTAAC ATTTAATGAA (2) GTCATAGCTG (2) TATCAAGATT
| 19.7 | 0.0197 |
| P2.5 retina | GACAGGGGAA GTCATAGCTG (2) TATCAAGATT TTTAAAGAGA (2)
| 19.4 | 0.0194 |
| P4.5 retina | ACAGAAAGTG (3) ATAAAGTAAC GTCATAGCTG (2) TATCAAGATT
| 11.9 | 0.0119 |
| P6.5 retina | ATAAAGTAAC CTCCGCCAGG GACAGGGGAA GTCATAGCTG (2) TATCAAGATT TATTTCCTCC TTTAAAGAGA (2)
| 21.7 | 0.0217 |
| P10.5 crx- retina | AACATATGGT AAGAAGAAAA (2) ACAGAAAGTG (3) ATAAAGTAAC ATTTAATGAA (2) CTCCGCCAGG TTTAAAGAGA (2)
| 22.5 | 0.0225 |
| P10.5 crx+ retina | ATAAAGTAAC TATCAAGATT
| 19.2 | 0.0192 |
| Adult retinal | ATAAAGTAAC GACAGGGGAA GTCATAGCTG (2) TATCAAGATT TTTAAAGAGA (2)
| 11.3 | 0.0113 |
| ONL | AAGAAGAAAA (2) ATAAAGTAAC GACAGGGGAA GTCATAGCTG (2) TATCAAGATT TTTAAAGAGA (2)
| 22.8 | 0.0228 |