Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.233009	Rap1b	RAS related protein 1b	10		215449
Gene Ontology	GTP binding | small GTPase mediated signal transduction
Human Homolog	RAP1B[RAP1B, member of RAS oncogene family]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 84 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGCAAGCAAG CAAAAAAAAA (2) CATATGTGTG CTACTTTTCT TATGAAAATG (2) TGTAACTGGT 78.2 0.0782 Cb medulloblastoma CAAAAAAAAA (2) TATGAAAATG (2) 111 0.111 P8 GC+1d culture AGCAAGCAAG CAAAAAAAAA (2) CTACTTTTCT TATGAAAATG (2) TGTAACTGGT 75.4 0.0754 P8 GC+SHH+1d culture AGCAAGCAAG CAAAAAAAAA (2) CTACTTTTCT TATGAAAATG (2) TGTAACTGGT 83 0.083 3T3 fibroblasts AGCAAGCAAG GTCATAGCTG (2) TATGAAAATG (2) TGTAACTGGT 24.5 0.0245 E15 cortex CAAAAAAAAA (2) GTCATAGCTG (2) TATGAAAATG (2) TGTAACTGGT 59.2 0.0592 P1 cortex CAAAAAAAAA (2) TATGAAAATG (2) TGTAACTGGT 31.7 0.0317 Hypothalamus CAAAAAAAAA (2) TATGAAAATG (2) 63.3 0.0633 E12.5 retina AGCAAGCAAG CAAAAAAAAA (2) TATGAAAATG (2) TGTAACTGGT 41.3 0.0413 E14.5 retina AGCAAGCAAG CAAAAAAAAA (2) TAATGAGATT TATGAAAATG (2) 38.3 0.0383 E16.5 retina CAAAAAAAAA (2) CATATGTGTG TAATGAGATT TATGAAAATG (2) 56.1 0.0561 E18.5 retina CAAAAAAAAA (2) CTACTTTTCT TAATGAGATT TATGAAAATG (2) TGTAACTGGT 78.1 0.0781 P0.5 retina AGCAAGCAAG CAAAAAAAAA (2) GTCATAGCTG (2) TAATGAGATT TATGAAAATG (2) TGTAACTGGT 166.8 0.1668 P2.5 retina CAAAAAAAAA (2) GTCATAGCTG (2) TAATGAGATT TATGAAAATG (2) TGTAACTGGT 79.3 0.0793 P4.5 retina CAAAAAAAAA (2) GTCATAGCTG (2) TATGAAAATG (2) TGTAACTGGT 57.5 0.0575 P6.5 retina CAAAAAAAAA (2) GTCATAGCTG (2) TATGAAAATG (2) 53.3 0.0533 P10.5 crx- retina CAAAAAAAAA (2) CATATGTGTG CTACTTTTCT TATGAAAATG (2) TGTAACTGGT 61.4 0.0614 P10.5 crx+ retina AGCAAGCAAG CAAAAAAAAA (2) CATATGTGTG TATGAAAATG (2) TGTAACTGGT 67.2 0.0672 Adult retinal CAAAAAAAAA (2) CATATGTGTG GTCATAGCTG (2) TATGAAAATG (2) 33.5 0.0335 ONL AGCAAGCAAG CAAAAAAAAA (2) GTCATAGCTG (2) TATGAAAATG (2) 45.9 0.0459