Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.247113	A230103N10Rik	RIKEN cDNA A230103N10 gene	11		104625
Gene Ontology	exonuclease activity | hydrolase activity | magnesium ion binding | nuclease activity | nucleus | regulation of transcription, DNA-dependent | RNA binding
Human Homolog	KIAA1194[carbon catabolite repression 4 protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 115 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACAAAAAAAA (2) CCTTGAAATA (2) TAACAAAACC TCATCTGGAA TGTATTTCTT 16.2 0.0162 Cb medulloblastoma ACAAAAAAAA (2) CAGAGAAAAT TAACAAAACC 41.6 0.0416 P8 GC+1d culture AATGTTAATT ACAAAAAAAA (2) ACAGAAGAAA ATGCACACTA CCTTGAAATA (2) GATACTGGAA GGACACTTAA TAACAAAACC TCATCTGGAA TGTATTTCTT 30.7 0.0307 P8 GC+SHH+1d culture AATGTTAATT ACAAAAAAAA (2) ACAGAAGAAA GATACTGGAA GGACACTTAA TAACAAAACC TCATCTGGAA TGTATTTCTT 32.9 0.0329 3T3 fibroblasts CCTTGAAATA (2) GTCATAGCTG (2) TCATCTGGAA 21 0.021 E15 cortex ACAAAAAAAA (2) ACAGAAGAAA CCTTGAAATA (2) GTCATAGCTG (2) 24.6 0.0246 P1 cortex ACAAAAAAAA (2) ACAGAAGAAA CCTTGAAATA (2) TAACAAAACC 27.1 0.0271 Hypothalamus ACAAAAAAAA (2) ATTCATCTGT (2) GGCACAATAT TAACAAAACC TCATCTGGAA TGTATTTCTT 23.5 0.0235 E12.5 retina ACAAAAAAAA (2) CAGAGAAAAT TCATCTGGAA TGTATTTCTT 13.2 0.0132 E14.5 retina ACAAAAAAAA (2) ATTCATCTGT (2) GGCACAATAT TGTATTTCTT 18.2 0.0182 E16.5 retina ACAAAAAAAA (2) ACAGAAGAAA GGACACTTAA GGCACAATAT GGCACTTTAA TAACAAAACC TGTATTTCTT TTGATGGCTG 23.4 0.0234 E18.5 retina ACAAAAAAAA (2) TCATCTGGAA TGTATTTCTT 21.8 0.0218 P0.5 retina ACAAAAAAAA (2) ATGCACACTA GTCATAGCTG (2) TAACAAAACC TCATCTGGAA TGTATTTCTT 27.6 0.0276 P2.5 retina ACAAAAAAAA (2) ACAGAAGAAA CCTTGAAATA (2) GGCACAATAT GTCATAGCTG (2) TAACAAAACC TCATCTGGAA TGTATTTCTT 28.2 0.0282 P4.5 retina ACAAAAAAAA (2) CATTTGTACA (4) CCTTGAAATA (2) GTCATAGCTG (2) TAACAAAACC TCATCTGGAA TGTATTTCTT TTGATGGCTG 37.6 0.0376 P6.5 retina AATGTTAATT ACAAAAAAAA (2) ACAGAAGAAA CATTTGTACA (4) CCTTGAAATA (2) GGCACTTTAA GTCATAGCTG (2) TAACAAAACC TCATCTGGAA TGTATTTCTT 30 0.03 P10.5 crx- retina ACAAAAAAAA (2) CCTTGAAATA (2) GATACTGGAA TAACAAAACC TCATCTGGAA 16.9 0.0169 P10.5 crx+ retina ACAAAAAAAA (2) ATTCATCTGT (2) CCTTGAAATA (2) TAACAAAACC TCATCTGGAA 28.7 0.0287 Adult retinal ATGCACACTA CCTTGAAATA (2) GTCATAGCTG (2) TAACAAAACC 9.4 0.0094 ONL ACAAAAAAAA (2) ATGCACACTA CAGAGAAAAT CCTTGAAATA (2) GTCATAGCTG (2) TAACAAAACC TCATCTGGAA 32.4 0.0324