Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.248517	Taf6	TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor	5		21343
Gene Ontology	DNA binding | nucleus | regulation of transcription, DNA-dependent | transcription factor TFIID complex | transcription initiation | transcription initiation factor activity
Human Homolog	TAF6[TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 50 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTGTACATTC (2) TGCTGACCTC (2) 8.2 0.0082 Cb medulloblastoma GTGTACATTC (2) 4.6 0.0046 P8 GC+1d culture CTCCGGTCTC (2) GGAACAGAGA (2) GGTAGAGGTG GTGTACATTC (2) TGCTGACCTC (2) TGCTGACTCC 13.6 0.0136 P8 GC+SHH+1d culture GTGTACATTC (2) TGCTGACCTC (2) 4.6 0.0046 3T3 fibroblasts GGTAGAGGTG TGCTGACCTC (2) 10.5 0.0105 E15 cortex GTGTACATTC (2) TGCTGACCTC (2) 9.8 0.0098 Hypothalamus TGCTGACCTC (2) TGCTGACTCC 3.6 0.0036 E12.5 retina CTCCGGTCTC (2) GTGTACATTC (2) TGCTGACCTC (2) 5.7 0.0057 E14.5 retina GGAACAGAGA (2) GGTAGAGGTG GTGTACATTC (2) TGCTGACCTC (2) 10.9 0.0109 E16.5 retina GTGTACATTC (2) TACACAACAG TGCTGACCTC (2) 12.7 0.0127 E18.5 retina GTGTACATTC (2) TGCTGACCTC (2) 11 0.011 P0.5 retina GGAACAGAGA (2) GTGTACATTC (2) TGCTGACCTC (2) 13.8 0.0138 P2.5 retina GTGTACATTC (2) TGCTGACCTC (2) 10.5 0.0105 P4.5 retina CATTTGTACA (4) GTGTACATTC (2) TGCTGACCTC (2) 11.9 0.0119 P6.5 retina CATTTGTACA (4) GGAACAGAGA (2) TGCTGACCTC (2) 11.7 0.0117 P10.5 crx- retina CTCCGGTCTC (2) GTGTACATTC (2) TACACAACAG TGCTGACCTC (2) 20.4 0.0204 P10.5 crx+ retina GGTAGAGGTG TGCTGACCTC (2) 15.4 0.0154 Adult retinal TGCTGACCTC (2) 5.6 0.0056 ONL GTGTACATTC (2) TGCTGACCTC (2) TGCTGACTCC 7.6 0.0076