Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.249096	Atp6v1b2	ATPase, H+ transporting, V1 subunit B, isoform 2	8	8 B3.3	11966
Gene Ontology	ATP binding | ATP biosynthesis | ATP synthesis coupled proton transport | ATP-binding and phosphorylation-dependent chloride channel activity | cytoplasm | energy coupled proton transport, against electrochemical gradient | hydrogen ion transporter activity | hydrogen transport | hydrogen-exporting ATPase activity, phosphorylative mechanism | hydrogen-transporting ATP synthase activity, rotational mechanism | hydrogen-transporting ATPase activity, rotational mechanism | hydrolase activity | proton transport | proton-transporting two-sector ATPase complex
Human Homolog	ATP6V1B2[ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B, isoform 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 4 In Situ Hybridization Images

Images -- Click to Enlarge

SAGE Tags

Total 75 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACAGCCGTGG (2) ATTATATTTT GATATCATCA GGGTCAGCCC (2) 8.1 0.0081 Cb medulloblastoma ATTATATTTT GAAAAACCGC GTAGAGGCAC 6.9 0.0069 P8 GC+1d culture ACAGCCGTGG (2) ATTATATTTT GATATCATCA GTAGAGGCAC TATGTGGACT 19.3 0.0193 P8 GC+SHH+1d culture ACAGCCGTGG (2) ATTATATTTT GATATCATCA TATGTGGACT 12.9 0.0129 3T3 fibroblasts GATATCATCA GTCATAGCTG (2) 17.5 0.0175 E15 cortex GGGTCAGCCC (2) GTCATAGCTG (2) 9.8 0.0098 P1 cortex ATTATATTTT 4.5 0.0045 Hypothalamus ATTATATTTT CTGACCCCCC GAAAAACCGC GATATCATCA GGGTCAGCCC (2) TGCCACAAGA 23.4 0.0234 E12.5 retina ACAGCCGTGG (2) GATATCATCA 7.5 0.0075 E14.5 retina ATTATATTTT GAAAAACCGC GAAACCAGGC (2) GATATCATCA 9 0.009 E16.5 retina GAAACCAGGC (2) GATATCATCA GTAGAGGCAC TATGTGGACT TGCCACAAGA 14.4 0.0144 E18.5 retina ACAGCCGTGG (2) ATTATATTTT CTGACCCCCC GAAAAACCGC GATATCATCA GCCTGCCCTT 19.9 0.0199 P0.5 retina ACAGCCGTGG (2) GATATCATCA GTCATAGCTG (2) 15.7 0.0157 P2.5 retina ACAGCCGTGG (2) GATATCATCA GCCTGCCCTT GTCATAGCTG (2) 12.4 0.0124 P4.5 retina ATTATATTTT GAAAAACCGC GAAACCAGGC (2) GATATCATCA GTCATAGCTG (2) 15.9 0.0159 P6.5 retina ATTATATTTT GATATCATCA GTCATAGCTG (2) TATGTGGACT 18.4 0.0184 P10.5 crx- retina ATTATATTTT GATATCATCA TGCCACAAGA 7.5 0.0075 P10.5 crx+ retina ATTATATTTT GAAACCAGGC (2) GATATCATCA 13.4 0.0134 Adult retinal ATTATATTTT GATATCATCA GCCTGCCCTT GTAGAGGCAC GTCATAGCTG (2) 15 0.015 ONL ACAGCCGTGG (2) ATTATATTTT GATATCATCA GTCATAGCTG (2) 17.2 0.0172