Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.27897	Dnaja1	DnaJ (Hsp40) homolog, subfamily A, member 1	4		15502
Gene Ontology	protein folding | response to heat
Human Homolog	DNAJA1[DnaJ (Hsp40) homolog, subfamily A, member 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 124 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (2) ATAAAAAAAA (2) CTAGGTATGT CTGTTTTTAC (2) CTTAAATCTG GAATCATAAT (2) GAGAACGCAT GATATCTTTG GGGATATAAA TCGGTCTGTC 247.8 0.2478 Cb medulloblastoma AAAAAAAAAA (2) ATAAAAAAAA (2) CTTAAATCTG 827.8 0.8278 P8 GC+1d culture AAAAAAAAAA (2) ATAAAAAAAA (2) CTGTAGATGC CTTAAATCTG GGGATATAAA TCGGTCTGTC 237.4 0.2374 P8 GC+SHH+1d culture AAAAAAAAAA (2) ATAAAAAAAA (2) CTAGGTATGT CTGTAGATGC CTGTTTTTAC (2) CTTAAATCTG GGGATATAAA 325.6 0.3256 3T3 fibroblasts AAAAAAAAAA (2) CTGTAGATGC CTTAAATCTG 35 0.035 E15 cortex AAAAAAAAAA (2) GAGAACGCAT GATATCTTTG 222.6 0.2226 P1 cortex AAAAAAAAAA (2) CTGTTTTTAC (2) CTTAAATCTG GGGATATAAA 281.7 0.2817 Hypothalamus AAAAAAAAAA (2) ATAAAAAAAA (2) CTAGGTATGT CTGTAGATGC CTTAAATCTG GAATCATAAT (2) TCGGTCTGTC 153.9 0.1539 E12.5 retina AAAAAAAAAA (2) ATAAAAAAAA (2) CAGCAGTAGA (2) CTAGGTATGT CTGTAGATGC CTTAAATCTG GGGATATAAA 171 0.171 E14.5 retina AAAAAAAAAA (2) ATAAAAAAAA (2) CTAGGTATGT CTGTAGATGC CTTAAATCTG GGGATATAAA TCGGTCTGTC 134.8 0.1348 E16.5 retina AAAAAAAAAA (2) ATAAAAAAAA (2) CTAGGTATGT CTGTTTTTAC (2) CTTAAATCTG GAAAATGTAA GAGAACGCAT GGGATATAAA TTTTCTGTTT (3) 76 0.076 E18.5 retina AAAAAAAAAA (2) ATAAAAAAAA (2) CAGCAGTAGA (2) CTAGGTATGT CTTAAATCTG GGGATATAAA TCGGTCTGTC 443.8 0.4438 P0.5 retina AAAAAAAAAA (2) ATAAAAAAAA (2) CTGTAGATGC CTTAAATCTG GATATCTTTG 139.4 0.1394 P2.5 retina AAAAAAAAAA (2) ATAAAAAAAA (2) CTAGGTATGT CTGTAGATGC CTGTTTTTAC (2) CTTAAATCTG GGGATATAAA 369.7 0.3697 P4.5 retina AAAAAAAAAA (2) ATAAAAAAAA (2) CTAGGTATGT CTGTAGATGC CTTAAATCTG GAAAATGTAA GGGATATAAA 331 0.331 P6.5 retina AAAAAAAAAA (2) ATAAAAAAAA (2) CTAGGTATGT CTTAAATCTG GAATCATAAT (2) GGGATATAAA TTTTCTGTTT (3) 298.5 0.2985 P10.5 crx- retina AAAAAAAAAA (2) ATAAAAAAAA (2) CTAGGTATGT CTGTTTTTAC (2) CTTAAATCTG GAATCATAAT (2) GGGATATAAA TTTTCTGTTT (3) 87.5 0.0875 P10.5 crx+ retina AAAAAAAAAA (2) ATAAAAAAAA (2) CTTAAATCTG GATATCTTTG TCGGTCTGTC TTTTCTGTTT (3) 119 0.119 Adult retinal AAAAAAAAAA (2) CTGTAGATGC CTGTTTTTAC (2) CTTAAATCTG TCGGTCTGTC TTTTCTGTTT (3) 77.9 0.0779 ONL AAAAAAAAAA (2) ATAAAAAAAA (2) CTGTAGATGC CTTAAATCTG GAAAATGTAA 111 0.111