Mouse Retina SAGE Library    [Home]    [Libraries]    [Images]
Gene:              Accession:    
e.g., Rho or Rhodopsin e.g., BG297543 batch search
Tag:        Cytoband (Mm):    
e.g., CCCAGTTCAC e.g., 6 E3
Unigene:        Cytoband (Hs):    
e.g., Mm.2965 batch search e.g., 3q21-q24

 UniGene  Symbol  Name  Chr  Cytoband  LocusLink 
 Mm.279736 A430105D02RikRIKEN cDNA A430105D02 gene 1    77188 
 Mm.279736 Sf3b1splicing factor 3b, subunit 1 1  1 28.9 cM  81898 
 Gene Ontology mRNA processing | nuclear mRNA splicing, via spliceosome | nucleus | pre-mRNA splicing factor activity | spliceosome complex
 Human Homolog SF3B1[splicing factor 3b, subunit 1, 155kDa]
 Clusters 
   Neighbors    

No In Situ Hybridization images could be found.



SAGE Tags

Total 91 tags found with positive counts.

  all tags    reliable tags    sum by library with all tags    sum by library with reliable tags  
 Library  Tag (Other Genes)  Normalized Count  % in library 
P8 Cb GCATTTTTAAAA (4)
ATTTTTAAAT (2)
CAAACTGAAG (3)
CAGAATGTTG (4)
TTCTTAAGGG (2)
TTTTGTATAG
17.90.0179
Cb medulloblastomaATTTTTAAAA (4)
CAAACTGAAG (3)
CAGGACGCAC (2)
16.20.0162
P8 GC+1d cultureATTTTTAAAA (4)
ATTTTTAAAT (2)
CAAACTGAAG (3)
CAGAATGTTG (4)
TAACGGAAGG (2)
21.50.0215
P8 GC+SHH+1d cultureATTTTTAAAA (4)
ATTTTTAAAT (2)
CAAACTGAAG (3)
GGACATTACC
TTCTTAAGGG (2)
12.90.0129
3T3 fibroblastsCAAACTGAAG (3)
GTCATAGCTG (2)
17.50.0175
E15 cortexCAAACTGAAG (3)
GTCATAGCTG (2)
TGGAAACCAG (2)
29.60.0296
P1 cortexATTTTTAAAA (4)
CAAACTGAAG (3)
TTCTTAAGGG (2)
31.70.0317
HypothalamusATTTTTAAAA (4)
ATTTTTAAAT (2)
CAGATGATGC
CTACTGGATT (2)
TTCTTAAGGG (2)
27.10.0271
E12.5 retinaATTTTTAAAA (4)
CAAACTGAAG (3)
TTCTTAAGGG (2)
13.20.0132
E14.5 retinaATTTTTAAAA (4)
ATTTTTAAAT (2)
CAAACTGAAG (3)
CAGATGATGC
21.80.0218
E16.5 retinaCAAACTGAAG (3)
CAGATGATGC
CTACTGGATT (2)
TTCTTAAGGG (2)
TTTTGTATAG
14.40.0144
E18.5 retinaATTTTTAAAA (4)
CAAACTGAAG (3)
CAGATGATGC
TTCTTAAGGG (2)
12.70.0127
P0.5 retinaATTTTTAAAA (4)
CAGATGATGC
CAGGACGCAC (2)
CTACTGGATT (2)
GTCATAGCTG (2)
15.80.0158
P2.5 retinaATTTTTAAAA (4)
CAAACTGAAG (3)
CAGATGATGC
CAGGACGCAC (2)
GGACATTACC
GTCATAGCTG (2)
TAACGGAAGG (2)
TTCTTAAGGG (2)
17.80.0178
P4.5 retinaATTTTTAAAA (4)
CAAACTGAAG (3)
CAGAATGTTG (4)
CTACTGGATT (2)
GTCATAGCTG (2)
TGGAAACCAG (2)
TTCTTAAGGG (2)
TTTTGTATAG
220.022
P6.5 retinaATTTTTAAAA (4)
CAAACTGAAG (3)
CAGAATGTTG (4)
CAGGACGCAC (2)
GGACATTACC
GTCATAGCTG (2)
TTCTTAAGGG (2)
250.025
P10.5 crx- retinaATTTTTAAAA (4)
ATTTTTAAAT (2)
CAGAATGTTG (4)
CAGGACGCAC (2)
TAACGGAAGG (2)
150.015
P10.5 crx+ retinaATTTTTAAAA (4)
CAGAATGTTG (4)
GGACATTACC
TGGAAACCAG (2)
9.50.0095
Adult retinalATTTTTAAAA (4)
ATTTTTAAAT (2)
GGACATTACC
GTCATAGCTG (2)
18.60.0186
ONLATTTTTAAAA (4)
GTCATAGCTG (2)
15.30.0153