Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.28357	Map1lc3b	microtubule-associated protein 1 light chain 3 beta	8		67443
Gene Ontology	microtubule-based process | protein binding
Human Homolog	MAP1LC3B[microtubule-associated protein 1 light chain 3 beta]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 103 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGCGAGCTCA CAAGTGCACT (3) CAGCTGTCTT CAGCTGTTTA (2) CAGCTTTTTT (2) CAGTTATTTT (4) GACTGAAGCC (2) TATGTACTGA (3) 75.1 0.0751 Cb medulloblastoma AGCGAGCTCA CAGCTCGCTG CAGCTGTCTT CAGGGAAGGT CAGTTATTTT (4) GGCAGCTGTC TATGTACTGA (3) 32.3 0.0323 P8 GC+1d culture CAAGTGCACT (3) CAGCTCGCTG CAGCTGTCTT CAGCTGTTTA (2) CAGCTTTTTT (2) CAGTTATTTT (4) GACTGAAGCC (2) TATGTACTGA (3) TCCCTGTGCA 93.4 0.0934 P8 GC+SHH+1d culture CAAAGTGCAC CAAGTGCACT (3) CAGCTGTCTT CAGCTGTTTA (2) CAGCTTTTTT (2) CAGGGAAGGT CAGTTATTTT (4) GGCAGCTGTC TATGTACTGA (3) 85.4 0.0854 3T3 fibroblasts CAAGTGCACT (3) CAGCTGTCTT GGCAGCTGTC GTGGGTGGGT 24.5 0.0245 E15 cortex CAAGTGCACT (3) CAGCTCGCTG CAGCTGTCTT CAGCTTTTTT (2) GAGCTCAGTT 39.4 0.0394 P1 cortex CAGCTGTCTT 13.6 0.0136 Hypothalamus CAAGTGCACT (3) CAGCTGTCTT CAGCTGTTTA (2) CAGGGAAGGT GACTGAAGCC (2) TATGTACTGA (3) 25.3 0.0253 E12.5 retina CAAGTGCACT (3) CAGCTGTCTT CAGCTTTTTT (2) TATGTACTGA (3) 22.5 0.0225 E14.5 retina AGCGAGCTCA CAAGTGCACT (3) CAGCTGTCTT CAGCTTTTTT (2) GAGCTCAGTT 30.9 0.0309 E16.5 retina CAAGTGCACT (3) CAGCTGTCTT GAGCTCAGTT TATGTACTGA (3) 23.6 0.0236 E18.5 retina AACAAGCTCT CAAAGTGCAC CAAGTGCACT (3) CAGCTGTCTT CAGGGAAGGT 20 0.02 P0.5 retina CAAGTGCACT (3) CAGCTGTCTT CAGCTGTTTA (2) CAGGGAAGGT GTGGGTGGGT 35.4 0.0354 P2.5 retina CAAGTGCACT (3) CAGCTGTCTT CAGCTGTTTA (2) CAGTTATTTT (4) 29.9 0.0299 P4.5 retina CAAGTGCACT (3) CAGCTGTCTT CAGCTGTTTA (2) CAGCTTTTTT (2) 33.8 0.0338 P6.5 retina AACAAGCTCT CAAAGTGCAC CAAGTGCACT (3) CAGCTGTCTT CAGCTGTTTA (2) CAGCTTTTTT (2) CAGGGAAGGT CAGTTATTTT (4) 31.8 0.0318 P10.5 crx- retina AACAAGCTCT CAAGTGCACT (3) CAGCTGTCTT TCCCTGTGCA 33.5 0.0335 P10.5 crx+ retina CAAGTGCACT (3) CAGCTGTCTT CAGGGAAGGT GTGGGTGGGT 28.8 0.0288 Adult retinal AACAAGCTCT CAAGTGCACT (3) CAGCTGTCTT TCCCTGTGCA 16.8 0.0168 ONL AACAAGCTCT CAAGTGCACT (3) CAGCTGTCTT 11.4 0.0114