Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.295742	Hnrpm	heterogeneous nuclear ribonucleoprotein M	17		76936
Gene Ontology	integral to plasma membrane | membrane fraction | nucleus | plasma membrane | ribonucleoprotein complex | RNA binding | transmembrane receptor activity | viral nucleocapsid
Human Homolog	HNRPM[heterogeneous nuclear ribonucleoprotein M]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 144 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGCTGAGTG (2) CGCCATTTTT (2) GAAGATGCTA (2) GCATTCATCA GCCTGTATGA GGAAGGGGAA (2) TGTATCTTTT (3) 21 0.021 Cb medulloblastoma CCTCCACCCA CGCCATTTTT (2) GAAGAGGGAA (2) GGAAGGGGAA (2) TAAAATCAAA 16.1 0.0161 P8 GC+1d culture AAGCTGAGTG (2) CTGAAGCAGT (3) CTTGGAGAAC GAAGGACCCT (2) GATGTGGGTG (2) GCATTCATCA GCCTGTATGA GCCTGTGTAA (2) GGGTGGGAAA TAAAATCAAA 31.7 0.0317 P8 GC+SHH+1d culture AAGCTGAGTG (2) CAAAAGGCTG CCATTCATCA CTGAAGCAGT (3) CTTGGAGAAC GAAGAGGGAA (2) GAAGGACCCT (2) GCCAGCTTAG GCCTGTATGA GCCTGTGTAA (2) GGGTGGGAAA TGTATCTTTT (3) 42.1 0.0421 3T3 fibroblasts AAGCTGAGTG (2) CCTCCACCCA CTGAAGCAGT (3) GATGTGGGTG (2) GTCATAGCTG (2) TTGGGGTGGG 73.6 0.0736 E15 cortex AAGCTGAGTG (2) GGGTGGGAAA GTCATAGCTG (2) 19.7 0.0197 P1 cortex AAGCTGAGTG (2) CAAAAGGCTG CTGAAGCAGT (3) TTGGGGTGGG 27.1 0.0271 Hypothalamus AAGCTGAGTG (2) CTTGGAGAAC GCCAGCTTAG GCCTGTGTAA (2) GGTGGAGCCG TAAAATCAAA TGTATCTTTT (3) 14.4 0.0144 E12.5 retina AAGCTGAGTG (2) CAAAAGGCTG CTGAAGCAGT (3) GAAGATGCTA (2) GCATTCATCA GGGTGGGAAA TGTATCTTTT (3) 45.2 0.0452 E14.5 retina AAGCTGAGTG (2) CCATTCATCA CTGAAGCAGT (3) GCCTGTGTAA (2) GGCTCTGGTG (2) GGGCCCCCCT GGTGGAGCCG TGTATCTTTT (3) TTGGGGTGGG 23.5 0.0235 E16.5 retina AAGCTGAGTG (2) CCATTCATCA CTTGGAGAAC GAAAGATGCT GCCTGTGTAA (2) GGCTCTGGTG (2) 34.3 0.0343 E18.5 retina AAGCTGAGTG (2) CTGAAGCAGT (3) GAAAGATGCT GCCTGTGTAA (2) GGCCTAAGCA (2) TAAAATCAAA 30.9 0.0309 P0.5 retina AAGCTGAGTG (2) CCATTCATCA CCTCCACCCA GAAGATGCTA (2) GAAGGACCCT (2) GGCCTAAGCA (2) GGGTGGGAAA GTCATAGCTG (2) 37.4 0.0374 P2.5 retina AAGCTGAGTG (2) CTGAAGCAGT (3) GAAAGATGCT GAAGGACCCT (2) GCCTGTGTAA (2) GGCCTAAGCA (2) GGGTGGGAAA GTCATAGCTG (2) TGTATCTTTT (3) TTGGGGTGGG 35.4 0.0354 P4.5 retina AAGCTGAGTG (2) CTGAAGCAGT (3) CTTGGAGAAC GAAAGATGCT GAAGATGCTA (2) GAAGGACCCT (2) GATGTGGGTG (2) GCCTGTGTAA (2) GTCATAGCTG (2) TGTATCTTTT (3) 33.8 0.0338 P6.5 retina AAGCTGAGTG (2) CAAAAGGCTG CCTCCACCCA GAAGATGCTA (2) GAAGGACCCT (2) GCCTGTGTAA (2) GGCCTAAGCA (2) GGGTGGGAAA GTCATAGCTG (2) TGTATCTTTT (3) 38.5 0.0385 P10.5 crx- retina AAGCTGAGTG (2) GGCCTAAGCA (2) 24.2 0.0242 P10.5 crx+ retina AAGCTGAGTG (2) GAAGAGGGAA (2) GCCAGCTTAG GCCTGTGTAA (2) GGGCCCCCCT GGTGGAGCCG TAAAATCAAA TGTATCTTTT (3) 24.8 0.0248 Adult retinal AAGCTGAGTG (2) CCTCCACCCA CTTGGAGAAC GCCTGTGTAA (2) GGGTGGGAAA GTCATAGCTG (2) 20.6 0.0206 ONL AAGCTGAGTG (2) CCTCCACCCA CGCCATTTTT (2) GAAGAGGGAA (2) GGCTCTGGTG (2) GGGCCCCCCT GTCATAGCTG (2) TAAAATCAAA 32.4 0.0324