Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.298893	Csnk2a1	casein kinase II, alpha 1 polypeptide	2	2 H1	12995
Gene Ontology	ATP binding | beta-catenin binding | kinase activity | protein amino acid phosphorylation | protein binding | protein kinase activity | protein kinase CK2 complex | protein serine/threonine kinase activity | transferase activity | Wnt receptor signaling pathway
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 111 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAATATTCCA AAGGTCTTTA CCATCCAGTG CCTTTAATCC (3) GCACAACTTC (2) GCAGGGGGCA TATGAAATTC TGGTGGAATG TTGGATTTGT 81.5 0.0815 Cb medulloblastoma AAGGTCTTTA AAGGTTTTTA CCTTTAATCC (3) GCACAACTTC (2) TGGTGGAATG TTGGATTTGT 57.7 0.0577 P8 GC+1d culture AAATATTCCA AAGGTCTTTA AAGGTTTTTA CCATCCAGTG CCTTTAATCC (3) GCACAACTTC (2) GCAGGGGGCA TGGTACTTTA (3) TGGTGGAATG 50 0.05 P8 GC+SHH+1d culture AAATATTCCA AAGGTCTTTA AAGGTTTTTA CCATCCAGTG CCTTTAATCC (3) GCAGGGGGCA GTACTGGGCA TGGTACTTTA (3) 44.6 0.0446 3T3 fibroblasts CCATCCAGTG CCTTTAATCC (3) GCAGGGGGCA TGGTGGAATG TTGGATTTGT 101.6 0.1016 E15 cortex CCTTTAATCC (3) GCACAACTTC (2) TGGTGGAATG 74.1 0.0741 P1 cortex AAATATTCCA AAGGTCTTTA CCTTTAATCC (3) GCAGGGGGCA TGGTGGAATG 186.2 0.1862 Hypothalamus AAATATTCCA AAGGTTTTTA CCTTTAATCC (3) TGGTGGAATG 28.9 0.0289 E12.5 retina AAGGTCTTTA CCTTTAATCC (3) GCACAACTTC (2) GCAGGGGGCA TGGTGGAATG TTGGATTTGT 103.4 0.1034 E14.5 retina AAGGTCTTTA CCTTTAATCC (3) GTACTGGGCA TATGAAATTC 131.2 0.1312 E16.5 retina AAGGTTTTTA CCTTTAATCC (3) GCACAACTTC (2) 74.2 0.0742 E18.5 retina AAATATTCCA AAGGTCTTTA AAGGTTTTTA CCTTTAATCC (3) GCACAACTTC (2) GCAGGGGGCA GTACTGGGCA TGGTGGAATG 43.5 0.0435 P0.5 retina AAATATTCCA AAGGTCTTTA CCTTTAATCC (3) GCAGGGGGCA TGGTGGAATG 90.3 0.0903 P2.5 retina AAATATTCCA AAGGTCTTTA AAGGTTTTTA CCTTTAATCC (3) GCAGGGGGCA TATGAAATTC 88.1 0.0881 P4.5 retina AAATATTCCA AAGGTCTTTA AAGGTTTTTA CCATCCAGTG CCTTTAATCC (3) TGGTGGAATG 75.3 0.0753 P6.5 retina AAATATTCCA AAGGTCTTTA AAGGTTTTTA CCTTTAATCC (3) GCACAACTTC (2) 101.7 0.1017 P10.5 crx- retina AAATATTCCA AAGGTCTTTA AAGGTTTTTA CCTTTAATCC (3) 76.2 0.0762 P10.5 crx+ retina AAATATTCCA AAGGTCTTTA CCTTTAATCC (3) GCACAACTTC (2) TGGTGGAATG 53.7 0.0537 Adult retinal AAGGTCTTTA CCATCCAGTG CCTTTAATCC (3) GCACAACTTC (2) GCAGGGGGCA TGGTACTTTA (3) 140.9 0.1409 ONL AAATATTCCA AAGGTCTTTA CCTTTAATCC (3) TATGAAATTC 91.9 0.0919