Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.300271	Rpl9	ribosomal protein L9	5		20005
Gene Ontology	cytosolic ribosome (sensu Eukarya) | intracellular | protein biosynthesis | ribosome | ribosome biogenesis | RNA binding | structural constituent of ribosome
Human Homolog	RPL9[ribosomal protein L9]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 142 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AACAATGTGG (2) AACAATTTGG (2) AACAATTTTG (2) AACATTTTGG (3) AACGATTTGG ATCAAGGGTG ATGGACTTTA GACAATTTGG (2) TCTGCAGCTG (3) 244.6 0.2446 Cb medulloblastoma AACAATGTGG (2) AACAATTTGG (2) AACTATTTGG GCCTCCAATG GGGATGTATT (2) TCTGCAGCTG (3) TGGTCAGGAT (2) 180.2 0.1802 P8 GC+1d culture AACAATTTGG (2) ACTGCAGATG AGAAAGGAAG ATGGACTTTA CTTGGCTTCC GACAATTTGG (2) GCCTCCAATG TCTGCAGCTG (3) 137 0.137 P8 GC+SHH+1d culture AACAATTTGG (2) AACATTTTGG (3) AACTATTTGG ACTGCAGATG AGAAAGGAAG ATGGACTTTA GACAATTTGG (2) GCCTCCAATG TCTGCAGCTG (3) TGGTCAGGAT (2) 189.8 0.1898 3T3 fibroblasts AACAATTTGG (2) ACTGCAGATG GCCTCCAATG GTCATAGCTG (2) TCTGCAGCTG (3) 52.5 0.0525 E15 cortex AACAATTTGG (2) AACAATTTTG (2) AACTATTTGG GGGATGTATT (2) GTCATAGCTG (2) 168 0.168 P1 cortex AACAATTTGG (2) ACTGCAGATG AGAAAGGAAG GGGATGTATT (2) TCTGCAGCTG (3) 68 0.068 Hypothalamus AACAATTGGG (2) AACAATTTGG (2) ACTGCAGATG ATCAAGGGTG TCTGCAGCTG (3) TGGTCAGGAT (2) 137.6 0.1376 E12.5 retina AACAATTTGG (2) ATCAAGGGTG CTTGGCTTCC GACAATTTGG (2) TCTGCAGCTG (3) TGGTCAGGAT (2) 323 0.323 E14.5 retina AACAATTTGG (2) AACGATTTGG AACTATTTGG ACTGCAGATG ATCAAGGGTG GACAATTTGG (2) GGGATGTATT (2) TGGTCAGGAT (2) 220.4 0.2204 E16.5 retina AACAATTTGG (2) AACAATTTTG (2) ACTGCAGATG ATCAAGGGTG CTTGGCTTCC TCTGCAGCTG (3) TGGTCAGGAT (2) 253.5 0.2535 E18.5 retina AACAATTTGG (2) AACAATTTTG (2) ATCAAGGGTG TCTGCAGCTG (3) TGGTCAGGAT (2) 276.5 0.2765 P0.5 retina AACAATTTGG (2) AACAATTTTG (2) AACGATTTGG ACTGCAGATG ATCAAGGGTG CTTGGCTTCC GACAATTTGG (2) GTCATAGCTG (2) TCTGCAGCTG (3) TGGTCAGGAT (2) 208.2 0.2082 P2.5 retina AACAATTTGG (2) AGAAAGGAAG ATCAAGGGTG ATGGACTTTA CTTGGCTTCC GACAATTTGG (2) GTCATAGCTG (2) TCTGCAGCTG (3) TGGTCAGGAT (2) 202.6 0.2026 P4.5 retina AACAATTGGG (2) AACAATTTGG (2) AACAATTTTG (2) AACGATTTGG AACTATTTGG GTCATAGCTG (2) TCTGCAGCTG (3) TGGTCAGGAT (2) 204.1 0.2041 P6.5 retina AACAATTTGG (2) AACAATTTTG (2) ACTGCAGATG ATGGACTTTA GTCATAGCTG (2) TCTGCAGCTG (3) TGGTCAGGAT (2) 158.5 0.1585 P10.5 crx- retina AACAATGTGG (2) AACAATTGGG (2) AACAATTTGG (2) AACTATTTGG ATCAAGGGTG CTTGGCTTCC TCTGCAGCTG (3) TGGTCAGGAT (2) 106 0.106 P10.5 crx+ retina AACAATTTGG (2) TCTGCAGCTG (3) TGGTCAGGAT (2) 136.6 0.1366 Adult retinal AACAATTTGG (2) AACAATTTTG (2) AACATTTTGG (3) ACTGCAGATG CTTGGCTTCC GACAATTTGG (2) GCCTCCAATG GTCATAGCTG (2) TCTGCAGCTG (3) TGGTCAGGAT (2) 113.3 0.1133 ONL AACAATTTGG (2) AGAAAGGAAG GCCTCCAATG GTCATAGCTG (2) TCTGCAGCTG (3) TGGTCAGGAT (2) 101.4 0.1014