Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.3118	Actr1a	ARP1 actin-related protein 1 homolog A (yeast)	19		54130
Gene Ontology	actin cytoskeleton | actin filament | cytoskeleton | dynactin complex | microtubule associated complex | motor activity | structural constituent of cytoskeleton | structural molecule activity | vesicle-mediated transport
Human Homolog	ACTR1A[ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 93 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATAACAAAGA GAACTGCAGG (2) GACTGCAGTG GATTTACGGC GCAGGAGCCC GGATTCGGAG (2) GGTTGCCACA GTGCTAGAGG (3) TTGCCTTTTG (2) 42.4 0.0424 Cb medulloblastoma GACTGCAGTG GATTGGAGGT GGATTCGGAG (2) GGCTCAGGAC GGTTGCCACA 13.8 0.0138 P8 GC+1d culture GAACTGCAGG (2) GACTGCAGTG GATTGGAGGT GGCTCAGGAC 28.5 0.0285 P8 GC+SHH+1d culture CCTCACTCCA GAACTGCAGG (2) GACTGCAGTG GATTGGAGGT GCAGGAGCCC GGATTCGGAG (2) GGCTCAGGAC 32.8 0.0328 3T3 fibroblasts GACTGCAGTG GCAGGAGCCC GGATTCGGAG (2) GGCTCAGGAC GTGCTAGAGG (3) 59.6 0.0596 E15 cortex GAACTGCAGG (2) GACTGCAGTG TTGCCTTTTG (2) 39.5 0.0395 P1 cortex GAACTGCAGG (2) GACTGCAGTG GGCTCAGGAC 27.2 0.0272 Hypothalamus GACTGCAGTG GGCTCAGGAC TTGCCTTTTG (2) 10.8 0.0108 E12.5 retina GAACTGCAGG (2) GACTGCAGTG GCAGCCTCTT (3) GGCTCAGGAC 20.7 0.0207 E14.5 retina GAACTGCAGG (2) GACTGCAGTG GCAGCCTCTT (3) 5.4 0.0054 E16.5 retina GAACTGCAGG (2) GACTGCAGTG GGTTGCCACA TTGCCTTTTG (2) 18.1 0.0181 E18.5 retina GAACTGCAGG (2) GACTGCAGTG GATGTGTAAA 7.2 0.0072 P0.5 retina GAACTGCAGG (2) GACTGCAGTG GATGTGTAAA GCAGGAGCCC 17.8 0.0178 P2.5 retina GACTGCAGTG GATGTGTAAA GGTTGCCACA 10.6 0.0106 P4.5 retina ATAACAAAGA GACTGCAGTG GATGTGTAAA GCAGCCTCTT (3) 31.8 0.0318 P6.5 retina GACAGCACAG GACTGCAGTG GATGTGTAAA GATTTACGGC GCAGCCTCTT (3) GGCTCAGGAC 55 0.055 P10.5 crx- retina GACTGCAGTG GATGTGTAAA GCAGCCTCTT (3) GGCTCAGGAC 20.5 0.0205 P10.5 crx+ retina ATAACAAAGA CCTCACTCCA GAACTGCAGG (2) GACTGCAGTG GATGTGTAAA GGCTCAGGAC 90.2 0.0902 Adult retinal GAACTGCAGG (2) GACTGCAGTG GATGTGTAAA GATTGGAGGT GGCTCAGGAC TTGCCTTTTG (2) 55.8 0.0558 ONL CCTCACTCCA GACAGCACAG GACTGCAGTG GATGTGTAAA GATTGGAGGT GGTTGCCACA GTGCTAGAGG (3) 67 0.067