Mouse Retina SAGE Library    [Home]    [Libraries]    [Images]
Gene:              Accession:    
e.g., Rho or Rhodopsin e.g., BG297543 batch search
Tag:        Cytoband (Mm):    
e.g., CCCAGTTCAC e.g., 6 E3
Unigene:        Cytoband (Hs):    
e.g., Mm.2965 batch search e.g., 3q21-q24

 UniGene  Symbol  Name  Chr  Cytoband  LocusLink 
 Mm.3213 Ldlrlow density lipoprotein receptor 9  9 5.0 cM  16835 
 Gene Ontology calcium ion binding | cholesterol homeostasis | cholesterol metabolism | coated pit | endocytosis | endosome | extracellular space | integral to membrane | lipid transport | lipid transporter activity | low-density lipoprotein receptor activity | membrane | protein binding | receptor activity
 Human Homolog LDLR[low density lipoprotein receptor (familial hypercholesterolemia)]
 Clusters 
   Neighbors    

No In Situ Hybridization images could be found.



SAGE Tags

Total 51 tags found with positive counts.

  all tags    reliable tags    sum by library with all tags    sum by library with reliable tags  
 Library  Tag (Other Genes)  Normalized Count  % in library 
P8 Cb GCAAAAAAAAAA (2)
TCTGTCACCT (2)
205.50.2055
Cb medulloblastomaAAAAAAAAAA (2)
TCTGTCACCT (2)
8070.807
P8 GC+1d cultureAAAAAAAAAA (2)
GGTAACCTAA
TCTGTCACCT (2)
TGACAAATCT (2)
213.40.2134
P8 GC+SHH+1d cultureAAAAAAAAAA (2)
GGTAACCTAA
TCTGTCACCT (2)
290.40.2904
3T3 fibroblastsAAAAAAAAAA (2)
GGTAACCTAA
TCTGTCACCT (2)
350.035
E15 cortexAAAAAAAAAA (2)
TCTGTCACCT (2)
217.70.2177
P1 cortexAAAAAAAAAA (2)
AGAGGCTCCA
249.90.2499
HypothalamusAAAAAAAAAA (2)
GGTAACCTAA
TCTGTCACCT (2)
126.80.1268
E12.5 retinaAAAAAAAAAA (2)
GGTAACCTAA
TCTGTCACCT (2)
146.40.1464
E14.5 retinaAAAAAAAAAA (2)
TCTGTCACCT (2)
96.50.0965
E16.5 retinaAAAAAAAAAA (2)
GGTAACCTAA
TCTGTCACCT (2)
47.10.0471
E18.5 retinaAAAAAAAAAA (2)
TCTGTCACCT (2)
TGACAAATCT (2)
383.80.3838
P0.5 retinaAAAAAAAAAA (2)
TCTGTCACCT (2)
TTTGTCACCT
121.80.1218
P2.5 retinaAAAAAAAAAA (2)
TCTGTCACCT (2)
334.40.3344
P4.5 retinaAAAAAAAAAA (2)
TCTGTCACCT (2)
287.30.2873
P6.5 retinaAAAAAAAAAA (2)
TCTGTCACCT (2)
268.50.2685
P10.5 crx- retinaAAAAAAAAAA (2)
TCTGTCACCT (2)
50.20.0502
P10.5 crx+ retinaAAAAAAAAAA (2)
TCTGTCACCT (2)
103.80.1038
Adult retinalAAAAAAAAAA (2)
TGACAAATCT (2)
59.30.0593
ONLAAAAAAAAAA (2)
AGAGGCTCCA
TCTGTCACCT (2)
TTTGTCACCT
118.60.1186