| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | ATGATAATGA (2) CCCCTCCTGA (3)
| 9.8 | 0.0098 |
| Cb medulloblastoma | CCCCTCCTGA (3) TCCATATTTT (2)
| 6.9 | 0.0069 |
| P8 GC+1d culture | ATGATAATGA (2) CCCCTCCTGA (3) TCCATATTTT (2)
| 9.1 | 0.0091 |
| P8 GC+SHH+1d culture | AAGATTGGGG CCCCTCCTGA (3) TCCATATTTT (2)
| 12.9 | 0.0129 |
| 3T3 fibroblasts | AAGATTGGGG CCCCTCCTGA (3)
| 17.5 | 0.0175 |
| E15 cortex | CCCCTCCTGA (3)
| 9.9 | 0.0099 |
| P1 cortex | ATGATAATGA (2) CCCCTCCTGA (3) TCCATATTTT (2)
| 13.5 | 0.0135 |
| Hypothalamus | ATGATAATGA (2) ATTTTGTAAA (2) TCCATATTTT (2)
| 7.2 | 0.0072 |
| E12.5 retina | ATGATAATGA (2) CCCCTCCTGA (3) GCTGATCTGT
| 15.1 | 0.0151 |
| E14.5 retina | CCCCTCCTGA (3) TCCATATTTT (2)
| 7.3 | 0.0073 |
| E16.5 retina | ATTTTGTAAA (2) CCCCTCCTGA (3) TCCATATTTT (2)
| 5.4 | 0.0054 |
| E18.5 retina | ATGATAATGA (2) CCCCTCCTGA (3)
| 7.3 | 0.0073 |
| P0.5 retina | CCCCTCCTGA (3)
| 15.7 | 0.0157 |
| P2.5 retina | ATTTTGTAAA (2) CCCCTCCTGA (3) TCCATATTTT (2)
| 5.4 | 0.0054 |
| P4.5 retina | CCCCTCCTGA (3) TCCATATTTT (2)
| 11.9 | 0.0119 |
| P6.5 retina | CCCCTCCTGA (3)
| 1.7 | 0.0017 |
| P10.5 crx- retina | CCCCTCCTGA (3)
| 13 | 0.013 |
| P10.5 crx+ retina | CCCCTCCTGA (3) TCCATATTTT (2)
| 11.5 | 0.0115 |
| Adult retinal | AAGATTGGGG
| 1.9 | 0.0019 |
| ONL | ATTTTGTAAA (2) CCCCTCCTGA (3) GCTGATCTGT TCCATATTTT (2)
| 11.4 | 0.0114 |