Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.34102	Odc1	ornithine decarboxylase, structural 1	12	12 6.0 cM	18263
Gene Ontology	carboxy-lyase activity | catalytic activity | lyase activity | ornithine decarboxylase activity | polyamine biosynthesis
Human Homolog	ODC1[ornithine decarboxylase 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 134 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATACTAACGT GCAATTTTTA GCCACTTCCT (2) GGGGCAGGGG (2) TAATAAAAAT TGTGACCCCC 63.5 0.0635 Cb medulloblastoma ATACTAACGT GCCACTTCCT (2) TAATAAAAAT TGGGCCGGAG TGGGGCCAGT TGTGACCCCC 34.6 0.0346 P8 GC+1d culture ATACTAACGT GCAATTTTTA GCCACTTCCT (2) TAATAAAAAT TCTGAAAAGT TGTGACCCCC 89 0.089 P8 GC+SHH+1d culture ATACTAACGT GCAATTTTTA GCCACTTCCT (2) TAATAAAAAT TGGGGCCAGT TGTCACATAA TGTGACCCCC 111.2 0.1112 3T3 fibroblasts ATACTAACGT GTCATAGCTG (2) TGTGACCCCC 24.5 0.0245 E15 cortex ATACTAACGT GCCACTTCCT (2) GTCATAGCTG (2) TAATAAAAAT TGTGACCCCC 49.3 0.0493 P1 cortex ATACTAACGT GAATTTTTAT (3) TAATAAAAAT TCTGTGCCCA (2) 27.1 0.0271 Hypothalamus ATACTAACGT CAAAACGTGT GCCACTTCCT (2) TAATAAAAAT TAATACAAAT TGGGGCCAGT TGTCACATAA TGTGACCCCC 41.5 0.0415 E12.5 retina ATACTAACGT GAATTTTTAT (3) GCAATTTTTA GCCACTTCCT (2) TAATAAAAAT TCTTGTGCCC TGTGACCCCC 71.5 0.0715 E14.5 retina ATACTAACGT CGGAATTTTT (2) GCCACTTCCT (2) TAATAAAAAT TAATACAAAT TCTGTGCCCA (2) TCTTGTGCCC TGTCACATAA TGTGACCCCC 116.5 0.1165 E16.5 retina ATACTAACGT CAAAACGTGT CGGAATTTTT (2) GCCACTTCCT (2) TAATAAAAAT TAATACAAAT TCTGAAAAGT TGTGACCCCC 90.5 0.0905 E18.5 retina ATACTAACGT CGGAATTTTT (2) GCCACTTCCT (2) TAATAAAAAT TAATACAAAT TGGGCCGGAG TGTGACCCCC 105.4 0.1054 P0.5 retina ATACTAACGT GCAATTTTTA GGACAGGATT GTCATAGCTG (2) TAATAAAAAT TCTGTGCCCA (2) TGGGGCCAGT TGTGACCCCC 51.2 0.0512 P2.5 retina ATACTAACGT GCCACTTCCT (2) GTCATAGCTG (2) TAATAAAAAT TAATACAAAT TCTGTGCCCA (2) TCTTGTGCCC TGTGACCCCC 88.2 0.0882 P4.5 retina ATACTAACGT GCAATTTTTA GCCACTTCCT (2) GGACAGGATT GTCATAGCTG (2) TAATAAAAAT TAATACAAAT TCTGTGCCCA (2) TGTGACCCCC 71.6 0.0716 P6.5 retina ATACTAACGT CAAAACGTGT GGACAGGATT GGGGCAGGGG (2) GTCATAGCTG (2) TAATAAAAAT TCTGAAAAGT TGTGACCCCC 96.7 0.0967 P10.5 crx- retina ATACTAACGT GCAATTTTTA GCCACTTCCT (2) TAATAAAAAT TAATACAAAT TCTGTGCCCA (2) TGTCACATAA TGTGACCCCC 40.9 0.0409 P10.5 crx+ retina ATACTAACGT TAATAAAAAT TCTGAAAAGT TCTGTGCCCA (2) TGGGGCCAGT TGTGACCCCC 51.8 0.0518 Adult retinal ATACTAACGT GTCATAGCTG (2) TAATAAAAAT TGTGACCCCC 48.2 0.0482 ONL ATACTAACGT GGGGCAGGGG (2) GTCATAGCTG (2) TAATAAAAAT TCTGTGCCCA (2) TGGGCCGGAG TGTGACCCCC 84.2 0.0842