Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.35738	AI225934	expressed sequence AI225934	2		98884
Mm.35738	Catns	catenin src	2	2 47.8 cM	12388
Gene Ontology	cell adhesion | cytoskeleton | lamellipodium | membrane fraction | nucleus | protein binding | structural molecule activity
Human Homolog	CTNND1[catenin (cadherin-associated protein), delta 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 49 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGCTTTGGGG (2) TGTTTTTAAA (2) 3.2 0.0032 Cb medulloblastoma TGTTTTTAAA (2) 2.3 0.0023 P8 GC+1d culture GGCCTTGGGG (2) GGCTTTGGGG (2) TGTGGCTTGG (3) TGTTTTTAAA (2) 8 0.008 P8 GC+SHH+1d culture CCTCCATTAC (2) GGCCTTGGGG (2) GGCTTTGGGG (2) TGTTTTTAAA (2) 9.4 0.0094 3T3 fibroblasts GGCCTTGGGG (2) GTCATAGCTG (2) 14 0.014 E15 cortex GGCCTTGGGG (2) GGCTTTGGGG (2) GTCATAGCTG (2) 39.5 0.0395 P1 cortex GGCTTTGGGG (2) 4.5 0.0045 E12.5 retina GGCTTGGGGA (2) GGCTTTGGGG (2) 3.8 0.0038 E14.5 retina GGCCTTGGGG (2) GGCTTGGGGA (2) 7.3 0.0073 E16.5 retina GGCCTTGGGG (2) TGTGGCTTGG (3) 5.4 0.0054 P0.5 retina GGCCTTGGGG (2) GGCTTTGGGG (2) GTCATAGCTG (2) 9.8 0.0098 P2.5 retina GGCCTTGGGG (2) GGCTTTGGGG (2) GTCATAGCTG (2) TGTGGCTTGG (3) TGTTTTTAAA (2) 17.6 0.0176 P4.5 retina CCTCCATTAC (2) GGCCTTGGGG (2) GTCATAGCTG (2) TGTTTTTAAA (2) 11.9 0.0119 P6.5 retina GGCCTTGGGG (2) GGCTTTGGGG (2) GTCATAGCTG (2) TGTTTTTAAA (2) 10 0.01 P10.5 crx- retina GGCTTGGGGA (2) GGCTTTGGGG (2) 3.8 0.0038 P10.5 crx+ retina CCTCCATTAC (2) GGCTTTGGGG (2) TGTTTTTAAA (2) 11.5 0.0115 Adult retinal GGCTTTGGGG (2) GTCATAGCTG (2) 3.8 0.0038 ONL GGCTTTGGGG (2) GTCATAGCTG (2) TGTTTTTAAA (2) 9.5 0.0095