Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.43331	Sfrs5	splicing factor, arginine/serine-rich 5 (SRp40, HRS)	12		20384
Gene Ontology	mRNA splice site selection | nuclear mRNA splicing, via spliceosome | nucleus | regulation of transcription, DNA-dependent | RNA binding | spliceosome complex
Human Homolog	SFRS5[splicing factor, arginine/serine-rich 5]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 139 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGGTTTCTC AGACAAGCTG CCCAGGCTCA GTTTTTTAAA TGGAAAAAAA (4) TGGGTTGTTT TTTTTAAAAT 31 0.031 Cb medulloblastoma AGACAAGCTG CCCGGGCTCG CCTTTGGTCT (2) GTTTTTTAAA TGGAAAAAAA (4) TGGGTTGTTT TTTGTACTTT TTTTTTAAAA (3) 66.9 0.0669 P8 GC+1d culture AAGGTTTCTC AGACAAGCTG CCCAGGCTCA CCCGGGCTCG GTTTTTTAAA TGGAAAAAAA (4) TGGGTTGTTT TTTGTACTTT TTTTTAAAAT 43.4 0.0434 P8 GC+SHH+1d culture AGACAAGCTG CCCAGGCTCA CCTTTGGTCT (2) GTTTTTTAAA TGGAAAAAAA (4) TGGGTTGTTT TTTGTACTTT TTTTTAAAAT TTTTTTAAAA (3) 50.4 0.0504 3T3 fibroblasts AGACAAGCTG CCCAGGCTCA CCTTTGGTCT (2) 63 0.063 E15 cortex AGACAAGCTG CCCAGGCTCA GTTTTTTAAA TGGAAAAAAA (4) 19.6 0.0196 P1 cortex AGACAAGCTG CCCAGGCTCA GTTTTTTAAA 27.2 0.0272 Hypothalamus AAGGTTTCTC AGACAAGCTG AGTGGCTGTC CCCAGGCTCA GTTTTTTAAA TGGAAAAAAA (4) TGGGTTGTTT TTTGTACTTT 48.8 0.0488 E12.5 retina AAGGTTTCTC AGACAAGCTG GTTTTTTAAA TGGAAAAAAA (4) TGGGTTGTTT TTTGTACTTT TTTTTAAAAT 52.7 0.0527 E14.5 retina AAGGTTTCTC AGACAAGCTG GTTTTTTAAA TGGAAAAAAA (4) TGGGTTGTTT TTTGTACTTT 41.8 0.0418 E16.5 retina CCCAGGCTCA CCCGGGCTCG GTTTTTTAAA TGGAAAAAAA (4) TGGGTTGTTT TTTTTAAAAT 25.2 0.0252 E18.5 retina AAGGTTTCTC AGACAAGCTG AGTGGCTGTC CCCAGGCTCA GTTTTTTAAA TGGAAAAAAA (4) TGGGTTGTTT TTTGTACTTT TTTTTAAAAT TTTTTTAAAA (3) 109.1 0.1091 P0.5 retina AAGGTTTCTC AGACAAGCTG CCCAGGCTCA GTTTTTTAAA TGGAAAAAAA (4) TGGGTTGTTT TTTTTAAAAT 84.4 0.0844 P2.5 retina AAGGTTTCTC AGACAAGCTG ATGCCCGGCT CCCAGGCTCA GTTTTTTAAA TGGAAAAAAA (4) TGGGTTGTTT TTTTTAAAAT TTTTTTAAAA (3) 74 0.074 P4.5 retina AAGGTTTCTC AGACAAGCTG CCCAGGCTCA CCCGGGCTCG GTTTTTTAAA TGGAAAAAAA (4) TGGGTTGTTT TTTTTAAAAT 49.5 0.0495 P6.5 retina AGACAAGCTG AGTGGCTGTC ATGCCCGGCT CCCAGGCTCA GTTTTTTAAA TGGAAAAAAA (4) TGGGTTGTTT TTTGTACTTT TTTTTAAAAT 48.4 0.0484 P10.5 crx- retina AGACAAGCTG GTTTTTTAAA TGGAAAAAAA (4) TGGGTTGTTT TTTGTACTTT TTTTTAAAAT 26.1 0.0261 P10.5 crx+ retina AGACAAGCTG ATGCCCGGCT CCCAGGCTCA GTTTTTTAAA TGGAAAAAAA (4) TGGGTTGTTT TTTTTAAAAT 42.3 0.0423 Adult retinal AAGGTTTCTC AGACAAGCTG AGTGGCTGTC CCCAGGCTCA GTTTTTTAAA TGGAAAAAAA (4) TGGGTTGTTT 40.9 0.0409 ONL AAGGTTTCTC AGACAAGCTG CCCAGGCTCA GTTTTTTAAA TGGGTTGTTT TTTTTAAAAT 22.9 0.0229