Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.4550	Atp1b1	ATPase, Na+/K+ transporting, beta 1 polypeptide	1	1 86.8 cM	11931
Gene Ontology	basolateral plasma membrane | integral to membrane | membrane | plasma membrane | potassium ion transport | sodium ion transport | sodium/potassium-exchanging ATPase activity | sodium/potassium-exchanging ATPase complex
Human Homolog	ATP1B1[ATPase, Na+/K+ transporting, beta 1 polypeptide]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 172 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAGAA ACAGCCCACC (2) CCACTCATCC GATTTGCACT (2) GCTGCCTGGC (2) GTAAAAAAAA (2) GTACTTTTAA GTACTTTTTA GTACTTTTTC TTCTAGCATA (4) TTGTGGTGAC (2) 74.8 0.0748 Cb medulloblastoma AAAAAAAGAA ACAGCCCACC (2) ATGCCTCCAG ATTTTCGAGG CCACTCATCC GATTTGCACT (2) GCTGCCTGGC (2) GCTTGAAAAA (3) GGGGAAATGG GGGGAACTGC (2) GTAAAAAAAA (2) GTACTTTTAA GTACTTTTTA GTACTTTTTC GTGGAAGAAT (2) TTCTAGCATA (4) TTGTGGTGAC (2) 298.1 0.2981 P8 GC+1d culture AAAAAAAGAA ACAGCCCACC (2) GATTTGCACT (2) GCTGCCTGGC (2) GTAAAAAAAA (2) GTACTTTTAA GTACTTTTTC TTCTAGCATA (4) TTGTGGTGAC (2) 101.4 0.1014 P8 GC+SHH+1d culture ACAGCCCACC (2) ATTTTCGAGG GATTTGCACT (2) GCTGCCTGGC (2) GTAAAAAAAA (2) GTACTTTTAA GTACTTTTTC GTGGAAGAAT (2) TTCTAGCATA (4) TTGTGGTGAC (2) 158.1 0.1581 3T3 fibroblasts GTAAAAAAAA (2) 7 0.007 E15 cortex CCACTCATCC GATTTGCACT (2) GTAAAAAAAA (2) TTGTGGTGAC (2) 64.2 0.0642 P1 cortex ACAGCCCACC (2) ATGCCTCCAG GATTTGCACT (2) GGGGAAATGG GTAAAAAAAA (2) TTCTAGCATA (4) TTGTGGTGAC (2) 127.1 0.1271 Hypothalamus AAAAAAAGAA ACAGCCCACC (2) ATGCCTCCAG ATTTTCGAGG CGCTGGTGCT GATTTGCACT (2) GCTGCCTGGC (2) GCTTGAAAAA (3) GGGGAACTGC (2) GTAAAAAAAA (2) GTACTTTTAA GTACTTTTTC GTGGAAGAAT (2) TTCTAGCATA (4) TTGTGGTGAC (2) TTTTAGCATA 267.9 0.2679 E12.5 retina AAAAAAAGAA ACAGCCCACC (2) CCACTCATCC GATTTGCACT (2) GTAAAAAAAA (2) TTGTGGTGAC (2) 52.7 0.0527 E14.5 retina CCACTCATCC GATTTGCACT (2) GTAAAAAAAA (2) TTGTGGTGAC (2) 103.9 0.1039 E16.5 retina ACAGCCCACC (2) CCACTCATCC GATTTGCACT (2) GCTTGAAAAA (3) GTAAAAAAAA (2) GTACTTTTAA GTACTTTTTA TTGTGGTGAC (2) 101.3 0.1013 E18.5 retina ATGCCTCCAG CCACTCATCC GATTTGCACT (2) GTAAAAAAAA (2) GTACTTTTTA GTGGAAGAAT (2) TTCTAGCATA (4) TTGTGGTGAC (2) 216.4 0.2164 P0.5 retina GATTTGCACT (2) GTAAAAAAAA (2) TTCTAGCATA (4) TTGTGGTGAC (2) 72.7 0.0727 P2.5 retina AAAAAAAGAA ACAGCCCACC (2) CCACTCATCC GGGGAAATGG GTAAAAAAAA (2) GTGGAAGAAT (2) TTCTAGCATA (4) TTGTGGTGAC (2) 144.3 0.1443 P4.5 retina ACAGCCCACC (2) CCACTCATCC GATTTGCACT (2) GCTGCCTGGC (2) GTAAAAAAAA (2) GTACTTTTTC TTCTAGCATA (4) TTGTGGTGAC (2) TTTTAGCATA 192.3 0.1923 P6.5 retina ACAGCCCACC (2) ATGCCTCCAG ATTTTCGAGG CCACTCATCC GCTGCCTGGC (2) GTAAAAAAAA (2) GTACTTTTTC GTGGAAGAAT (2) TTCTAGCATA (4) TTGTGGTGAC (2) 115.3 0.1153 P10.5 crx- retina ACAGCCCACC (2) ATGCCTCCAG ATTTTCGAGG CCACTCATCC CGCTGGTGCT GATTTGCACT (2) GGGGAAATGG GGGGAACTGC (2) GTAAAAAAAA (2) GTACTTTTTC TTCTAGCATA (4) TTGTGGTGAC (2) 96.8 0.0968 P10.5 crx+ retina ACAGCCCACC (2) ATGCCTCCAG CCACTCATCC GATTTGCACT (2) GCTGCCTGGC (2) GTAAAAAAAA (2) GTACTTTTTC GTGGAAGAAT (2) TTCTAGCATA (4) TTGTGGTGAC (2) 151.8 0.1518 Adult retinal AAAAAAAGAA ACAGCCCACC (2) ATGCCTCCAG CCACTCATCC GATTTGCACT (2) GTAAAAAAAA (2) GTACTTTTTC GTGGAAGAAT (2) TTCTAGCATA (4) TTGTGGTGAC (2) 87.1 0.0871 ONL AAAAAAAGAA CCACTCATCC GATTTGCACT (2) GCTGCCTGGC (2) GCTTGAAAAA (3) GTAAAAAAAA (2) TTCTAGCATA (4) TTGTGGTGAC (2) 49.7 0.0497