Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.726	Bsg	basigin	10	10 42.4 cM	12215
Gene Ontology	extracellular space | integral to membrane | mannose binding | membrane | sugar binding
Human Homolog	BSG[basigin (OK blood group)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 156 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AATGACAAGG CACTGGCCTT CTCTGACTTA CTTTGACTTA GACTCACTGA (3) GCAGCCCTCC GCAGCCCTCT (2) 79.8 0.0798 Cb medulloblastoma AACCTCTGCC AATGACAAGG AGCATTCCAG CACTGGCCTT CTCTGACTTA GAGGCCTCTG GAGGGAGGGA GCAGCCCTCT (2) 55.4 0.0554 P8 GC+1d culture AATGACAAGG CACTGGCCTT CTCTGACTTA GAGGCCTCTG GCAGCCCCTA GCAGGCCTCT GGCAGGCCCC 67.2 0.0672 P8 GC+SHH+1d culture AAACCCCCCA AACCTCTGCC AATGAACAAG AATGACAAGG ATGACGCTAC CACTGGCCTT CTCTGACTTA GAGGCCCTCT GAGGCCTCTG GAGGGAGGGA GCAGCCCTCC 68.1 0.0681 3T3 fibroblasts AATGACAAGG CACTGGCCTT CTCTGACTTA GCAGCCCTCC GTCATAGCTG (2) 105.1 0.1051 E15 cortex CTCTGACTTA GAGGCCTCTG GAGGGGGGGG GCAGCCCCTA GCAGGCCTCT GTCATAGCTG (2) 44.3 0.0443 P1 cortex AGCATTCCAG CACTGGCCTT CTCTGACTTA GACTCACTGA (3) GAGGCCTCTG GCAGCCCCTA 118.1 0.1181 Hypothalamus AACCTCTGCC AATGACAAGG CACTGGCCTT CAGCCAGTTC (3) CTCTGACTTA GCAGCCCCTA 39.7 0.0397 E12.5 retina AACCTCTGCC AATGACAAGG AGCATTCCAG CACTGGCCTT CTCTGACTTA GGCAGGCCCC 62 0.062 E14.5 retina AACCTCTGCC AATGACAAGG CAGACGTGAA CTCTGACTTA GACTCACTGA (3) GAGGGGGGGG GCAGCCCCTA GCAGCCCTCT (2) 23.5 0.0235 E16.5 retina AATGACAAGG CACTGGCCTT CAGCCAGTTC (3) CTCTGACTTA GAGGCCTCTG GAGGGAGGGA GCAGCCCCTA GCAGCCCTCT (2) GCAGGCCTCT GCCAGCCCCT (2) 37.9 0.0379 E18.5 retina AATGACAAGG CACTGGCCTT CTCTGACTTA CTTTGACTTA GAGGCCCTCT GAGGCCTCTG GAGGGAGGGA GGCAGGCCCC 32.6 0.0326 P0.5 retina AACCTCTGCC CACTGGCCTT CTCTGACTTA GAGGCCTCTG GCAGCCCCTA GCCAGCCCCT (2) GGCAGGCCCC GTCATAGCTG (2) 39.3 0.0393 P2.5 retina AAACCCCCCA AATGACAAGG CACTGGCCTT CAGACGTGAA CTCTGACTTA CTTTGACTTA GAGGGAGGGA GCAGCCCCTA GCAGGCCTCT GGCAGGCCCC GTCATAGCTG (2) 60.2 0.0602 P4.5 retina AATGACAAGG AGCATTCCAG CTCTGACTTA GAGGCCCTCT GCAGCCCCTA GTCATAGCTG (2) 39.7 0.0397 P6.5 retina AGCATTCCAG CACTGGCCTT CTCTGACTTA GAGGCCTCTG GAGGGAGGGA GCAGCCCCTA GTCATAGCTG (2) 56.6 0.0566 P10.5 crx- retina AAACCCCCCA AACCTCTGCC AATGACAAGG CACTGGCCTT CAGCCAGTTC (3) CTCTGACTTA GAGGCCTCTG GAGGGGGGGG 78.3 0.0783 P10.5 crx+ retina AACCTCTGCC AATGACAAGG AGCATTCCAG ATGACGCTAC CACTGGCCTT CAGCCAGTTC (3) CTCTGACTTA GCAGCCCTCT (2) GGCAGGCCCC 88.3 0.0883 Adult retinal AAACCCCCCA AACCTCTGCC AATGACAAGG ATGACGCTAC CACTGGCCTT CAGACGTGAA CTCTGACTTA GCAGCCCTCC GCAGCCCTCT (2) GCAGGCCTCT GCCAGCCCCT (2) GTCATAGCTG (2) 83.7 0.0837 ONL AATGACAAGG AGCATTCCAG CACTGGCCTT CTCTGACTTA GAGGGAGGGA GCAGGCCTCT GTCATAGCTG (2) 47.8 0.0478