Mouse Retina SAGE Library    [Home]    [Libraries]    [Images]
Gene:              Accession:    
e.g., Rho or Rhodopsin e.g., BG297543 batch search
Tag:        Cytoband (Mm):    
e.g., CCCAGTTCAC e.g., 6 E3
Unigene:        Cytoband (Hs):    
e.g., Mm.2965 batch search e.g., 3q21-q24

 UniGene  Symbol  Name  Chr  Cytoband  LocusLink 
 Mm.85410 Smarcc1SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 9    20588 
 Gene Ontology chromatin | chromatin assembly/disassembly | chromatin binding | DNA packaging | intracellular | nucleus | organogenesis | SWI/SNF complex
 Human Homolog SMARCC1[SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1]
 Clusters 
   Neighbors    

No In Situ Hybridization images could be found.



SAGE Tags

Total 92 tags found with positive counts.

  all tags    reliable tags    sum by library with all tags    sum by library with reliable tags  
 Library  Tag (Other Genes)  Normalized Count  % in library 
P8 Cb GCAAAATGAACC (2)
AAGGCTCTGA
ACTGTCAGTT
GAAGACCCCA
TCATTGAACG
TGAAAAAAAA (2)
TGATGAGCAG
53.80.0538
Cb medulloblastomaAAGGCTCTGA
GAAGACCCAA
GATTTCAAAG (2)
TGAAAAAAAA (2)
85.50.0855
P8 GC+1d cultureAAAATGAACC (2)
AAGGCTCTGA
GATTTCAAAG (2)
TCATTGAACG
TGAAAAAAAA (2)
TGATGAGCAG
47.90.0479
P8 GC+SHH+1d cultureAAAATGAACC (2)
AAGGCTCTGA
ACTGTCAGTT
ATTAAACCTG
GAAGACCCCA
TGAAAAAAAA (2)
TGATGAGCAG
750.075
3T3 fibroblastsAAAATGAACC (2)
TGAAAAAAAA (2)
TGATGAGCAG
31.50.0315
E15 cortexACTGTCAGTT
GAAGACCCCA
TGAAAAAAAA (2)
TGATGAGCAG
44.40.0444
P1 cortexAAAATGAACC (2)
ACTGTCAGTT
ATTAAACCTG
TGAAAAAAAA (2)
31.70.0317
HypothalamusAAAATGAACC (2)
ATTAAACCTG
TGAAAAAAAA (2)
48.90.0489
E12.5 retinaAAAATGAACC (2)
ATTAAACCTG
GATTTCAAAG (2)
TGAAAAAAAA (2)
TGATGAGCAG
41.40.0414
E14.5 retinaAAAATGAACC (2)
AAGGCTCTGA
ACTGTCAGTT
CAGATCTCTG
GAAGACCCAA
TCATTGAACG
TGAAAAAAAA (2)
TGATGAGCAG
81.90.0819
E16.5 retinaAAAATGAACC (2)
ATTAAACCTG
TGAAAAAAAA (2)
TGATGAGCAG
43.40.0434
E18.5 retinaAAAATGAACC (2)
AAGGCTCTGA
TGAAAAAAAA (2)
85.50.0855
P0.5 retinaAAAATGAACC (2)
ATTAAACCTG
TGAAAAAAAA (2)
25.60.0256
P2.5 retinaAAAATGAACC (2)
ATTAAACCTG
GATTTCAAAG (2)
TCATTGAACG
TGAAAAAAAA (2)
61.60.0616
P4.5 retinaAAAATGAACC (2)
ACTGTCAGTT
TCATTGAACG
TGAAAAAAAA (2)
55.50.0555
P6.5 retinaAAAATGAACC (2)
AAGGCTCTGA
GATTTCAAAG (2)
TCATTGAACG
TGAAAAAAAA (2)
TGATGAGCAG
51.70.0517
P10.5 crx- retinaAAAATGAACC (2)
GATTTCAAAG (2)
TGAAAAAAAA (2)
13.10.0131
P10.5 crx+ retinaATTAAACCTG
GAAGACCCAA
TCATTGAACG
TGAAAAAAAA (2)
TGATGAGCAG
26.80.0268
Adult retinalAAAATGAACC (2)
ATTAAACCTG
GAAGACCCAA
GAAGACCCCA
TGAAAAAAAA (2)
24.20.0242
ONLAAAATGAACC (2)
CAGATCTCTG
TGAAAAAAAA (2)
34.50.0345