Mouse Retina SAGE Library    [Home]    [Libraries]    [Images]
Gene:              Accession:    
e.g., Rho or Rhodopsin e.g., BG297543 batch search
Tag:        Cytoband (Mm):    
e.g., CCCAGTTCAC e.g., 6 E3
Unigene:        Cytoband (Hs):    
e.g., Mm.2965 batch search e.g., 3q21-q24

 UniGene  Symbol  Name  Chr  Cytoband  LocusLink 
 Mm.94560 Cxxc5CXXC finger 5 18    67393 
 Gene Ontology DNA binding | zinc ion binding
 Human Homolog CXXC5[CXXC finger 5]
 Clusters 
   Neighbors    

No In Situ Hybridization images could be found.



SAGE Tags

Total 199 tags found with positive counts.

  all tags    reliable tags    sum by library with all tags    sum by library with reliable tags  
 Library  Tag (Other Genes)  Normalized Count  % in library 
P8 Cb GCAAAAAAAAAA (2)
AAAAAAAAAG
AATGAGAAAA (3)
ATAAAAAAAA (2)
ATAACAAAAA
ATGAGTGAGC (2)
GCAGGGAGAG
GCTGCCCTTG
GGATGGGGAG (2)
TGTGCGCCCT (3)
TTTGTGTCAA
TTTTTTTTTT (2)
303.40.3034
Cb medulloblastomaAAAAAAAAAA (2)
AAAAAAAAAG
ATAAAAAAAA (2)
ATAACAAAAA
ATGAGTGAGC (2)
GCTGCCCTTG
GCTGGGCCTG
GGATGGGGAG (2)
TGTGCGCCCT (3)
TTTTTTTTTT (2)
899.40.8994
P8 GC+1d cultureAAAAAAAAAA (2)
AAAAAAAAAG
AATGAGAAAA (3)
ATAAAAAAAA (2)
ATAACAAAAA
ATGAGTGAGC (2)
CAGGAGAAGC (2)
CCCGTCCCTC (3)
GCAGGGAGAG
GCTGCCCTTG
GGATGGGGAG (2)
GTTGGAAAGA
TGTGCAGAGG
TGTGCGCCCT (3)
TTTGTGTCAA
TTTGTGTCAT
TTTTTTTTTT (2)
303.30.3033
P8 GC+SHH+1d cultureAAAAAAAAAA (2)
AAAAAAAAAG
AATGAGAAAA (3)
ATAAAAAAAA (2)
ATAACAAAAA
ATGAGTGAGC (2)
GCAGGGAGAG
GCTCCTCCTT
GGATGGGGAG (2)
TGTGCGCCCT (3)
TGTTGTTGAA
TTTGTGTCAA
TTTGTGTCAT
TTTTTTTTTT (2)
370.20.3702
3T3 fibroblastsAAAAAAAAAA (2)
ATGAGTGAGC (2)
ATGGGGGTGG (2)
GGATGGGGAG (2)
TGTGCGCCCT (3)
73.50.0735
E15 cortexAAAAAAAAAA (2)
CAGGAAAGCT
GCTGCCCTTG
GGATGGGGAG (2)
TGTGCGCCCT (3)
TTTTTTTTTT (2)
252.20.2522
P1 cortexAAAAAAAAAA (2)
AAAAAAAAAG
CAGGAAAGCT
GCTGCCCTTG
GGATGGGGAG (2)
TTTTTTTTTT (2)
295.30.2953
HypothalamusAAAAAAAAAA (2)
AAAAAAAAAG
ATAAAAAAAA (2)
ATAACAAAAA
ATGGGGGTGG (2)
CAGGAAAGCT
CAGGAGAAGC (2)
GCAGGGAGAG
GCTGGGCCTG
GGATGGGGAG (2)
TGTGCGCCCT (3)
TTTTTTTTTT (2)
195.40.1954
E12.5 retinaAAAAAAAAAA (2)
AATGAGAAAA (3)
ATAAAAAAAA (2)
ATAACAAAAA
GGATGGGGAG (2)
TTTGTGTCAT
TTTTTTTTTT (2)
270.40.2704
E14.5 retinaAAAAAAAAAA (2)
AATGAGAAAA (3)
ATAAAAAAAA (2)
ATAACAAAAA
CCCGTCCCTC (3)
CCGCAGCGTT
GCTCCTCCTT
GGATGGGGAG (2)
TGTGCAGAGG
TGTGCGCCCT (3)
TTTGTGTCAA
TTTTTTTTTT (2)
191.20.1912
E16.5 retinaAAAAAAAAAA (2)
ATAAAAAAAA (2)
ATAACAAAAA
GCTCCTCCTT
GGATGGGGAG (2)
GTTGGAAAGA
TGTGCGCCCT (3)
TTTGTGTCAA
TTTTTTTTTT (2)
108.60.1086
E18.5 retinaAAAAAAAAAA (2)
AAAAAAAAAG
AATGAGAAAA (3)
ATAAAAAAAA (2)
ATAACAAAAA
CCCGTCCCTC (3)
GGATGGGGAG (2)
TGTGCGCCCT (3)
TGTTGTTGAA
TTTGTGTCAA
TTTTTTTTTT (2)
5020.502
P0.5 retinaAAAAAAAAAA (2)
ATAAAAAAAA (2)
ATAACAAAAA
ATGAGTGAGC (2)
CAGGAAAGCT
CTGTTTGTAT
GGATGGGGAG (2)
GTTGGAAAGA
TGTGCGCCCT (3)
TTTTTTTTTT (2)
208.20.2082
P2.5 retinaAAAAAAAAAA (2)
AAAAAAAAAG
AATGAGAAAA (3)
ATAAAAAAAA (2)
ATAACAAAAA
ATGAGTGAGC (2)
CAGGAAAGCT
CAGGAGAAGC (2)
GCAGGGAGAG
GGATGGGGAG (2)
TGTGCGCCCT (3)
TTTGTGTCAA
TTTTTTTTTT (2)
4700.47
P4.5 retinaAAAAAAAAAA (2)
AAAAAAAAAG
AATGAGAAAA (3)
ATAAAAAAAA (2)
ATAACAAAAA
ATGAGTGAGC (2)
GGATGGGGAG (2)
GTTGGAAAGA
TGTGCGCCCT (3)
TTTGTGTCAA
TTTTTTTTTT (2)
406.20.4062
P6.5 retinaAAAAAAAAAA (2)
AAAAAAAAAG
AATGAGAAAA (3)
ATAAAAAAAA (2)
ATAACAAAAA
CAGGAGAAGC (2)
GGATGGGGAG (2)
TGTGCGCCCT (3)
TTTGTGTCAA
TTTTTTTTTT (2)
381.80.3818
P10.5 crx- retinaAAAAAAAAAA (2)
AAAAAAAAAG
AATGAGAAAA (3)
ATAAAAAAAA (2)
ATGAGTGAGC (2)
CAGGAAAGCT
CTGTTTGTAT
GCAGGGAGAG
GGATGGGGAG (2)
TGTGCGCCCT (3)
TTTGTGTCAA
89.40.0894
P10.5 crx+ retinaAAAAAAAAAA (2)
AAAAAAAAAG
AATGAGAAAA (3)
ATAAAAAAAA (2)
CAGGAGAAGC (2)
GGATGGGGAG (2)
TGTGCAGAGG
TGTGCGCCCT (3)
TTTTTTTTTT (2)
195.90.1959
Adult retinalAAAAAAAAAA (2)
AAAAAAAAAG
ATGGGGGTGG (2)
CAGGAGAAGC (2)
GCAGGGAGAG
GGATGGGGAG (2)
TTTTTTTTTT (2)
90.90.0909
ONLAAAAAAAAAA (2)
AAAAAAAAAG
AATGAGAAAA (3)
ATAAAAAAAA (2)
CTGTTTGTAT
GGATGGGGAG (2)
TTTTTTTTTT (2)
153.10.1531