Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.18539	Pink1	PTEN induced putative kinase 1	4		68943
Gene Ontology	ATP binding | kinase activity | magnesium ion binding | mitochondrion | protein amino acid phosphorylation | protein kinase activity | protein serine/threonine kinase activity | protein-tyrosine kinase activity | transferase activity
Human Homolog	PINK1[PTEN induced putative kinase 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 51 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATGGCTCTGT CCAAAAAAAA (3) CCGAAAAAAA 26 0.026 Cb medulloblastoma CCAAAAAAAA (3) 90.2 0.0902 P8 GC+1d culture CCAAAAAAAA (3) CTGGTTGCTG (2) 41.1 0.0411 P8 GC+SHH+1d culture CCAAAAAAAA (3) CCGAAAAAAA CTGGTTGCTG (2) 42.2 0.0422 3T3 fibroblasts CTGGTTGCTG (2) 3.5 0.0035 E15 cortex CCAAAAAAAA (3) 9.9 0.0099 P1 cortex CCAAAAAAAA (3) 40.9 0.0409 Hypothalamus ACAGTATACG ATGGCTCTGT CCAAAAAAAA (3) CTGGTTGCTG (2) 54.2 0.0542 E12.5 retina CCAAAAAAAA (3) 16.9 0.0169 E14.5 retina CCAAAAAAAA (3) CCGAATAAAA CTGGTTGCTG (2) GCTCATAGTC (3) 23.6 0.0236 E16.5 retina ATGGCTCTGT CCAAAAAAAA (3) CTGGTTGCTG (2) 19.9 0.0199 E18.5 retina CCAAAAAAAA (3) CCGAAAAAAA CCGAATAAAA 41.8 0.0418 P0.5 retina CCAAAAAAAA (3) CCGAAAAAAA CTGGTTGCTG (2) 33.4 0.0334 P2.5 retina ATGGCTCTGT CCAAAAAAAA (3) CCGAAAAAAA 49.3 0.0493 P4.5 retina ATGGCTCTGT CCAAAAAAAA (3) CCGAATAAAA 43.6 0.0436 P6.5 retina ATGGCTCTGT CCAAAAAAAA (3) CCGAAAAAAA CCGAATAAAA 45 0.045 P10.5 crx- retina ATGGCTCTGT CCAAAAAAAA (3) CTGGTTGCTG (2) GCTCATAGTC (3) 26.1 0.0261 P10.5 crx+ retina ATGGCTCTGT CCAAAAAAAA (3) CTGGTTGCTG (2) 46 0.046 Adult retinal CCAAAAAAAA (3) CCGAAAAAAA GCTCATAGTC (3) 39 0.039 ONL CCAAAAAAAA (3) 7.7 0.0077