Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.262000	Ptp4a1	protein tyrosine phosphatase 4a1	1	1 B	19243
Gene Ontology	protein-tyrosine-phosphatase activity
Human Homolog	PTP4A1[protein tyrosine phosphatase type IVA, member 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 15 In Situ Hybridization Images

Images -- Click to Enlarge

SAGE Tags

Total 62 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AATTGGAAAT ATGGCTTAAT GTGTATTCCT TAGAGTATGC (3) 32.6 0.0326 Cb medulloblastoma ATGGCTTAAT 9.2 0.0092 P8 GC+1d culture AATTGGAAAT ATGGCTTAAT GTGTATTCCT TAGAGTATGC (3) 18.3 0.0183 P8 GC+SHH+1d culture AATTGGAAAT ATGGCTTAAT GTCGTCTGGT GTGTATTCCT TAGAGTATGC (3) 29.3 0.0293 3T3 fibroblasts GTCATAGCTG (2) 10.5 0.0105 E15 cortex AATTGGAAAT ATGGCTTAAT GTCATAGCTG (2) 19.7 0.0197 P1 cortex ATGGCTTAAT 9.1 0.0091 Hypothalamus ATGGCTTAAT GTGTATTCCT TAATGAACTT (2) 16.3 0.0163 E12.5 retina AATTGGAAAT ATGGCTTAAT GTGTATTCCT TAGAGTATGC (3) 30.1 0.0301 E14.5 retina ATGGCTTAAT TAATGAACTT (2) TAGAGTATGC (3) 14.5 0.0145 E16.5 retina AATTGGAAAT ATGGCTTAAT GTGTATTCCT TAATGAACTT (2) 23.5 0.0235 E18.5 retina AATTGGAAAT ATGGCTTAAT TAGAGTATGC (3) 30.9 0.0309 P0.5 retina ATGGCTTAAT GTCATAGCTG (2) GTCGTCTGGT TAGAGTATGC (3) 21.6 0.0216 P2.5 retina AATTGGAAAT ATGGCTTAAT GTCATAGCTG (2) GTGTATTCCT TAATGAACTT (2) 49.4 0.0494 P4.5 retina AATTGGAAAT ATGGCTTAAT GTCATAGCTG (2) GTGTATTCCT 25.8 0.0258 P6.5 retina AATTGGAAAT ATGGCTTAAT GTCATAGCTG (2) 21.6 0.0216 P10.5 crx- retina ATGGCTTAAT 7.4 0.0074 P10.5 crx+ retina AATTGGAAAT ATGGCTTAAT 5.7 0.0057 Adult retinal AATTGGAAAT ATGGCTTAAT GTCATAGCTG (2) TAGAGTATGC (3) 7.6 0.0076 ONL ATGGCTTAAT GTCATAGCTG (2) GTGTATTCCT 13.3 0.0133