Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.285993	Calm1	calmodulin 1	12	7 4.5 cM	12313
Gene Ontology	calcium ion binding | cell cycle | cytoplasm | G-protein coupled receptor protein signaling pathway | plasma membrane | protein binding
Human Homolog	CALM1[calmodulin 1 (phosphorylase kinase, delta)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 160 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACAAACTTAG (3) ACAGACTTAG ACGTGGCGCA ACTCGGAGCC AGAAACTGGC CAGCTTGATG CGGCCACTGG (3) CGGTCACTGG 107.6 0.1076 Cb medulloblastoma ACAAACTTAA ACAAACTTAG (3) ACGTGGCGCA ACTCGGAGCC ATTTAGTGTG CACTTATAAA CAGCTTGATG CGGCCACTGG (3) CGGTCACTGG GGACTGGGGC (6) GTGACAGTGA (3) GTGCGAGCGA TCCAACTTGT 154.7 0.1547 P8 GC+1d culture ACAAACTTAA ACAAACTTAG (3) ACTCGGAGCC CGGCCACTGG (3) CGGTCACTGG GGACTGGGGC (6) GTTCACTAGG TATTGGTCGG TCCAACTTGT 151.7 0.1517 P8 GC+SHH+1d culture ACAAACTTAG (3) ACTCGGAGCC CACTTATAAA CAGCTTGATG CGGCCACTGG (3) GGACTGGGGC (6) GTGACAGTGA (3) TATTGGTCGG TCCAACTTGT 108.9 0.1089 3T3 fibroblasts ACAAACTTAG (3) ACTCGGAGCC AGAAACTGGC CAGCTTGATG CGGCCACTGG (3) GTGACAGTGA (3) 98.1 0.0981 E15 cortex ACAAACTTAG (3) ACTCGGAGCC CGGCCACTGG (3) 118.7 0.1187 P1 cortex ACAAACTTAG (3) ACGTGGCGCA ACTCGGAGCC CGGCCACTGG (3) 68.1 0.0681 Hypothalamus ACAAACTTAG (3) ACGTGGCGCA ACTCGGAGCC ATTTAGTGTG CACTTATAAA CAGCTTGATG CGGCCACTGG (3) CGGTCACTGG GTGACAGTGA (3) GTGCGAGCGA GTTCACTAGG TATTGGTCGG TCCAACTTGT 163 0.163 E12.5 retina ACAAACTTAG (3) ACTCGGAGCC CGGCCACTGG (3) CGGTCACTGG GTTCACTAGG TCCAACTTGT 82.7 0.0827 E14.5 retina ACAAACTTAG (3) ACGTGGCGCA ACTCGGAGCC CAGCTTGATG CGGCCACTGG (3) GTGACAGTGA (3) GTGCGAGCGA GTTCACTAGG TATTGGTCGG 96.5 0.0965 E16.5 retina ACAAACTTAG (3) ACGTGGCGCA ACTCGGAGCC AGAAACTGGC CAGCTTGATG CGGCCACTGG (3) CGGTCACTGG GGACTGGGGC (6) GTGACAGTGA (3) GTGCGAGCGA TATTGGTCGG 132.2 0.1322 E18.5 retina ACAAACTTAG (3) ACGTGGCGCA ACTCGGAGCC CAGCTTGATG CGGCCACTGG (3) CGGTCACTGG GGACTGGGGC (6) TATTGGTCGG TCCAACTTGT 58.2 0.0582 P0.5 retina ACAAACTTAG (3) ACTCGGAGCC CAGCTTGATG CGGCCACTGG (3) GGACTGGGGC (6) 47.1 0.0471 P2.5 retina ACAAACTTAG (3) ACGTGGCGCA ACTCGGAGCC CAGCTTGATG CGGCCACTGG (3) GTGACAGTGA (3) GTGCGAGCGA 63.4 0.0634 P4.5 retina ACAAACTTAG (3) ACGTGGCGCA ACTCGGAGCC CAGCTTGATG CGGCCACTGG (3) GGACTGGGGC (6) 55.6 0.0556 P6.5 retina ACAAACTTAA ACAAACTTAG (3) ACGTGGCGCA ACTCGGAGCC CACTTATAAA CAGCTTGATG CGGCCACTGG (3) CGGTCACTGG GTTCACTAGG 60 0.06 P10.5 crx- retina ACAAACTTAG (3) ACAGACTTAG ACGTGGCGCA ACTCGGAGCC CACTTATAAA CAGCTTGATG CGGCCACTGG (3) CGGTCACTGG GGACTGGGGC (6) GTTCACTAGG TATTGGTCGG TCCAACTTGT 288.2 0.2882 P10.5 crx+ retina ACAAACTTAG (3) ACAGACTTAG ACGTGGCGCA ACTCGGAGCC CACTTATAAA CAGCTTGATG CGGCCACTGG (3) CGGTCACTGG GTGCGAGCGA TCCAACTTGT 178.6 0.1786 Adult retinal ACAAACTTAG (3) ACGTGGCGCA ACTCGGAGCC CAGCTTGATG CGGCCACTGG (3) TCCAACTTGT 90.9 0.0909 ONL ACAAACTTAG (3) ACTCGGAGCC CACTTATAAA CAGCTTGATG CGGCCACTGG (3) 28.7 0.0287