Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.29966	Ptbp2	polypyrimidine tract binding protein 2	3		56195
Gene Ontology	mRNA splice site selection | nucleic acid binding | pre-mRNA splicing factor activity | spliceosome complex
Human Homolog	PTBP2[polypyrimidine tract binding protein 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 75 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATTCTGACAA CTCAATAAAC (2) TATATTTTCT TATATTTTTT (2) 14.6 0.0146 Cb medulloblastoma TATATTTTCT TATTTTTCAA (3) 4.6 0.0046 P8 GC+1d culture CTGTTATCAT TATATTTTCT TATTTTTCAA (3) 15.9 0.0159 P8 GC+SHH+1d culture CAGCTTTTAA (2) CTCAATAAAC (2) CTGTTATCAT TATATTTTCT TATGTAATAT (2) TATTTTTCAA (3) 20 0.02 P1 cortex CTCAATAAAC (2) TATTTTTCAA (3) 13.6 0.0136 Hypothalamus CTCAATAAAC (2) TATATTTTCT TATTTTTCAA (3) 7.2 0.0072 E12.5 retina CAGCTTTTAA (2) CTCAATAAAC (2) CTGTTATCAT TATATTTTCT TTTACTCTGC 16.9 0.0169 E14.5 retina CTCAATAAAC (2) GCTCAGAATC TATATTTTCT TATATTTTTT (2) TTTACTCTGC 18.1 0.0181 E16.5 retina CTCAATAAAC (2) GCTCAGAATC TATATTTTCT TATTTTTCAA (3) TTTACTCTGC TTTTTATTAA (2) 25.3 0.0253 E18.5 retina CTCAATAAAC (2) GCTCAGAATC TATATTTTCT TATATTTTTT (2) 16.4 0.0164 P0.5 retina ATTCTGACAA CTCAATAAAC (2) TATTTTTCAA (3) TTTTTATTAA (2) 19.7 0.0197 P2.5 retina CAGCTTTTAA (2) CTCAATAAAC (2) CTGTTATCAT TATATTTTCT TTTACTCTGC 35.2 0.0352 P4.5 retina CTCAATAAAC (2) TATATTTTCT 6 0.006 P6.5 retina CAGCTTTTAA (2) CCTGGAGTCT CTCAATAAAC (2) TATATTTTCT TATTTTTCAA (3) 18.5 0.0185 P10.5 crx- retina CAGCTTTTAA (2) CTCAATAAAC (2) CTGTTATCAT TATATTTTCT TATGTAATAT (2) 16.7 0.0167 P10.5 crx+ retina CTCAATAAAC (2) CTGTTATCAT TATATTTTCT TTTACTCTGC 15.3 0.0153 Adult retinal CCTGGAGTCT TTTACTCTGC TTTTTATTAA (2) 5.7 0.0057 ONL ATTCTGACAA CAGCTTTTAA (2) CCTGGAGTCT CTCAATAAAC (2) TATATTTTCT TATTTTTCAA (3) TTTACTCTGC 13.3 0.0133