Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.66	Rps4x	ribosomal protein S4, X-linked	X	X 39.0 cM	20102
Gene Ontology	cell proliferation | cytosolic ribosome (sensu Eukarya) | cytosolic small ribosomal subunit (sensu Eukarya) | development | intracellular | protein biosynthesis | regulation of cell cycle | ribosome | ribosome biogenesis | RNA binding | structural constituent of ribosome
Human Homolog	RPS4X[ribosomal protein S4, X-linked]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 129 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTAAACTAAA GTCTCTCTTC (2) GTGAAACTAA GTGAAACTAC GTGAAACTGA GTGAAGCTAA (2) GTTTGTTACC TACAAGTTGT TTGAAACTAA 272.2 0.2722 Cb medulloblastoma GTGAAACTAA GTGAAACTAC 78.6 0.0786 P8 GC+1d culture CTGGAAAAGT GCTGCGCTAG GTAAACTAAA GTGAAACTAA GTGAAACTAC GTGAAACTAG GTGAAACTGA GTGGAACTAA TACAAGTTGT TGGACAAGTG (2) TTGAAACTAA 173.3 0.1733 P8 GC+SHH+1d culture AACCACATCA GCTGCGCTAG GTAAACTAAA GTCTCTCTTC (2) GTGAAACTAA GTGAAACTAC GTGAAGCTAA (2) GTGGAACTAA GTTTGTTACC TACAAGTTGT TTGAAACTAA 280.9 0.2809 3T3 fibroblasts GTGAAACTAA 17.5 0.0175 E15 cortex GTGAAACTAA 148.4 0.1484 P1 cortex GCTGCGCTAG GTGAAACTAA GTGAAACTAC GTGAAACTGA 68 0.068 Hypothalamus ATGCTCGTAC CAGCGATTCA GCTGCGCTAG GTCTCTCTTC (2) GTGAAACTAA GTGAAACTAC GTTTGTTACC TGAAAGATGC 130.3 0.1303 E12.5 retina AACCACATCA GCTGCGCTAG GTGAAACTAA GTGAAACTAC GTGAAACTAG GTGAAGCTAA (2) GTGAGACTAA GTTTGTTACC TGAAAGATGC 522.1 0.5221 E14.5 retina AACCACATCA CTGGAAAAGT GCTGCGCTAG GTGAAACTAA GTGAAACTAC GTGAAATTAA GTGAAGCTAA (2) GTTTGTTACC TACAAGTTGT TGAAAGATGC 307.8 0.3078 E16.5 retina AACCACATCA ATGCTCGTAC CAGCGATTCA GTCTCTCTTC (2) GTGAAACTAA GTGAAACTAC GTGAAATTAA GTGGAACTAA GTTTGTTACC TACAAGTTGT TGAAAGATGC 237.1 0.2371 E18.5 retina CAGCGATTCA CTGGAAAAGT GTCTCTCTTC (2) GTGAAACTAA GTGAAACTAC GTGAAACTAG GTGAAATTAA GTGAGACTAA GTGGAACTAA TACAAGTTGT TTGAAACTAA 680.3 0.6803 P0.5 retina ATGCTCGTAC GTGAAACTAA GTGAAACTAC GTGAAGCTAA (2) GTGAGACTAA GTGGAACTAA GTTTGTTACC TACAAGTTGT 184.7 0.1847 P2.5 retina AACCACATCA CAGCGATTCA CTGGAAAAGT GTGAAACTAA GTGAAACTAC GTGAAATTAA GTGGAACTAA TTGAAACTAA 242.9 0.2429 P4.5 retina GTGAAACTAA GTGAAACTAC GTGAAATTAA GTGGAACTAA TACAAGTTGT TTGAAACTAA 295.3 0.2953 P6.5 retina CAGCGATTCA GTCTCTCTTC (2) GTGAAACTAA GTGAAACTAC GTGAAATTAA GTGAGACTAA 138.5 0.1385 P10.5 crx- retina GTGAAACTAA GTGAAACTAC TACAAGTTGT 42.8 0.0428 P10.5 crx+ retina GTGAAACTAA GTGAAACTAC TACAAGTTGT 124.9 0.1249 Adult retinal GTGAAACTAA GTGAAACTAC TACAAGTTGT 63 0.063 ONL AACCACATCA GTGAAACTAA GTGAAACTAC TACAAGTTGT 26.8 0.0268