Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.109600	Atpaf1	ATP synthase mitochondrial F1 complex assembly factor 1	4		230649
Gene Ontology	biological_process unknown | cellular_component unknown | molecular_function unknown
Human Homolog	ATPAF1[ATP synthase mitochondrial F1 complex assembly factor 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 34 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACCTGAACCA ATTAAAAAAA (2) 4.9 0.0049 Cb medulloblastoma ACCTGAACCA 4.6 0.0046 P8 GC+1d culture ATTAAAAAAA (2) 2.3 0.0023 P8 GC+SHH+1d culture ATTAAAAAAA (2) CACCAGTGAG 5.9 0.0059 3T3 fibroblasts ATTAAAAAAA (2) 3.5 0.0035 E15 cortex CACCAGTGAG 4.9 0.0049 P1 cortex AGCCCTAATA CACCAGTGAG 9 0.009 Hypothalamus ACCTGAACCA ATTAAAAAAA (2) CACCAGTGAG 10.8 0.0108 E12.5 retina ACCTGAACCA ATTAAAAAAA (2) CACCAGTGAG 7.6 0.0076 E14.5 retina ACCTGAACCA ATTAAAAAAA (2) 14.5 0.0145 E16.5 retina ATTAAAAAAA (2) 3.6 0.0036 E18.5 retina ACCTGAACCA ATTAAAAAAA (2) 10.9 0.0109 P0.5 retina ACCTGAACCA 2 0.002 P2.5 retina ACCTGAACCA ATTAAAAAAA (2) CACCAGTGAG 5.4 0.0054 P4.5 retina AGCCCTAATA ATTAAAAAAA (2) 4 0.004 P6.5 retina ACCTGAACCA 1.7 0.0017 P10.5 crx- retina ACCTGAACCA ATTAAAAAAA (2) CACCAGTGAG 7.5 0.0075 P10.5 crx+ retina ACCTGAACCA 1.9 0.0019 Adult retinal ACCTGAACCA 3.7 0.0037 ONL AGCCCTAATA 1.9 0.0019