Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.12145	Rbbp4	retinoblastoma binding protein 4	4	4	19646
Gene Ontology	cell cycle | chromatin remodeling | DNA repair | DNA replication | nucleus | NuRD complex | protein binding | regulation of transcription, DNA-dependent
Human Homolog	RBBP4[retinoblastoma binding protein 4]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 83 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACTAACTGTG 27.7 0.0277 P8 Cb GC GTGGTTCACA (2) 14.7 0.0147 P8 Cb GC GAGAGTAACA 4.9 0.0049 P8 Cb GC CAAGTGTGGC (3) 1.6 0.0016 P8 Cb GC CTGGTGGGTT 1.6 0.0016 P8 Cb GC GCTGACAAGG 1.6 0.0016 Cb medulloblastoma GTGGTTCACA (2) 11.6 0.0116 Cb medulloblastoma ACTAACTGTG 9.2 0.0092 Cb medulloblastoma GAGAGTAACA 6.9 0.0069 Cb medulloblastoma CTGGTGGGTT 2.3 0.0023 P8 GC+1d culture ACTAACTGTG 21.7 0.0217 P8 GC+1d culture GTGGTTCACA (2) 18.3 0.0183 P8 GC+1d culture GAGAGTAACA 8 0.008 P8 GC+1d culture CAAGTGTGGC (3) 1.1 0.0011 P8 GC+SHH+1d culture GTGGTTCACA (2) 31.6 0.0316 P8 GC+SHH+1d culture ACTAACTGTG 28.1 0.0281 P8 GC+SHH+1d culture GAGAGTAACA 10.5 0.0105 3T3 fibroblasts GAGAGTAACA 24.5 0.0245 3T3 fibroblasts GTGGTTCACA (2) 17.5 0.0175 3T3 fibroblasts AAGGGTAGCT 3.5 0.0035 E15 cortex GCTGACAAGG 9.9 0.0099 E15 cortex GTGGTTCACA (2) 4.9 0.0049 P1 cortex GAGAGTAACA 36.4 0.0364 P1 cortex GTGGTTCACA (2) 27.3 0.0273 Hypothalamus GTGGTTCACA (2) 12.7 0.0127 Hypothalamus ACTAACTGTG 10.9 0.0109 Hypothalamus GAGAGTAACA 7.2 0.0072 Hypothalamus TTTATGTTTA (2) 1.8 0.0018 E12.5 retina ACTAACTGTG 41.3 0.0413 E12.5 retina GTGGTTCACA (2) 28.2 0.0282 E12.5 retina CAAGTGTGGC (3) 3.8 0.0038 E12.5 retina GAGAGTAACA 3.8 0.0038 E12.5 retina TTTATGTTTA (2) 3.8 0.0038 E12.5 retina CTGGTGGGTT 1.9 0.0019 E14.5 retina GTGGTTCACA (2) 51 0.051 E14.5 retina ACTAACTGTG 45.5 0.0455 E14.5 retina GAGAGTAACA 7.3 0.0073 E14.5 retina CTGGTGGGTT 1.8 0.0018 E14.5 retina TTTATGTTTA (2) 1.8 0.0018 E16.5 retina GTGGTTCACA (2) 39.8 0.0398 E16.5 retina ACTAACTGTG 38 0.038 E16.5 retina GAGAGTAACA 7.2 0.0072 E16.5 retina CTGGTGGGTT 3.6 0.0036 E16.5 retina TTTATGTTTA (2) 1.8 0.0018 E18.5 retina ACTAACTGTG 69.1 0.0691 E18.5 retina GTGGTTCACA (2) 40 0.04 E18.5 retina CTGGTGGGTT 5.5 0.0055 E18.5 retina GAGAGTAACA 5.5 0.0055 E18.5 retina ACTAACTGGG 1.8 0.0018 E18.5 retina TTTATGTTTA (2) 1.8 0.0018 P0.5 retina ACTAACTGTG 35.3 0.0353 P0.5 retina GTGGTTCACA (2) 35.3 0.0353 P0.5 retina GAGAGTAACA 13.7 0.0137 P0.5 retina CAAGTGTGGC (3) 5.9 0.0059 P0.5 retina AAGGGTAGCT 2 0.002 P2.5 retina ACTAACTGTG 22.9 0.0229 P2.5 retina GTGGTTCACA (2) 12.3 0.0123 P2.5 retina ACTAACTGGG 3.5 0.0035 P2.5 retina CAAGTGTGGC (3) 3.5 0.0035 P2.5 retina GAGAGTAACA 3.5 0.0035 P2.5 retina AAGGGTAGCT 1.8 0.0018 P4.5 retina ACTAACTGTG 33.7 0.0337 P4.5 retina GTGGTTCACA (2) 33.7 0.0337 P4.5 retina GAGAGTAACA 5.9 0.0059 P6.5 retina GTGGTTCACA (2) 25 0.025 P6.5 retina ACTAACTGTG 10 0.01 P6.5 retina GAGAGTAACA 3.3 0.0033 P6.5 retina CTGGTGGGTT 1.7 0.0017 P10.5 crx- retina ACTAACTGTG 22.3 0.0223 P10.5 crx- retina GTGGTTCACA (2) 20.4 0.0204 P10.5 crx- retina GAGAGTAACA 16.7 0.0167 P10.5 crx- retina CTGGTGGGTT 1.9 0.0019 P10.5 crx+ retina GTGGTTCACA (2) 32.7 0.0327 P10.5 crx+ retina ACTAACTGTG 26.9 0.0269 P10.5 crx+ retina GAGAGTAACA 5.8 0.0058 Adult retinal GTGGTTCACA (2) 33.3 0.0333 Adult retinal ACTAACTGTG 7.4 0.0074 Adult retinal CTGGTGGGTT 1.9 0.0019 Adult retinal GAGAGTAACA 1.9 0.0019 ONL GTGGTTCACA (2) 32.6 0.0326 ONL ACTAACTGTG 11.5 0.0115 ONL GAGAGTAACA 1.9 0.0019 ONL TTTATGTTTA (2) 1.9 0.0019