| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | CAAGAGGCAC (2) CACAAGTTTC (2)
| 40.8 | 0.0408 |
| Cb medulloblastoma | CAAGAGGCAC (2)
| 25.4 | 0.0254 |
| P8 GC+1d culture | AGATGGATTC (2) CAAGAGGCAC (2) CACAAGTTTC (2) CTAATGATTA (3)
| 59.2 | 0.0592 |
| P8 GC+SHH+1d culture | AGATGGATTC (2) CAAGAGGCAC (2) CTAATGATTA (3)
| 45.7 | 0.0457 |
| 3T3 fibroblasts | CAAGAGGCAC (2)
| 7 | 0.007 |
| E15 cortex | CAAGAGGCAC (2)
| 29.7 | 0.0297 |
| P1 cortex | CAAGAGGCAC (2)
| 4.5 | 0.0045 |
| Hypothalamus | AGATGGATTC (2) CAAGAGGCAC (2)
| 19.9 | 0.0199 |
| E12.5 retina | CAAGAGGCAC (2)
| 24.4 | 0.0244 |
| E14.5 retina | CAAGAGGCAC (2)
| 20 | 0.02 |
| E16.5 retina | CAAGAGGCAC (2)
| 21.7 | 0.0217 |
| E18.5 retina | ATGCCACATC (3) CAAGAGGCAC (2)
| 38.2 | 0.0382 |
| P0.5 retina | CAAGAGGCAC (2)
| 37.3 | 0.0373 |
| P2.5 retina | ATGCCACATC (3) CAAGAGGCAC (2) CTAATGATTA (3)
| 66.9 | 0.0669 |
| P4.5 retina | ATGCCACATC (3) CAAGAGGCAC (2)
| 37.7 | 0.0377 |
| P6.5 retina | ATGCCACATC (3) CAAAAGGCCC (3) CAAGAGGCAC (2) CTAATGATTA (3)
| 76.7 | 0.0767 |
| P10.5 crx- retina | AGATGGATTC (2) CAAGAGGCAC (2)
| 20.5 | 0.0205 |
| P10.5 crx+ retina | ATGCCACATC (3) CAAAAGGCCC (3) CAAGAGGCAC (2) CACAAGTTTC (2) CTAATGATTA (3)
| 46 | 0.046 |
| Adult retinal | CAAAAGGCCC (3) CAAGAGGCAC (2)
| 20.4 | 0.0204 |
| ONL | AGATGGATTC (2) CAAGAGGCAC (2)
| 9.6 | 0.0096 |