Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.150856	Hmg20a	high mobility group 20A	9		66867
Mm.150856	5830432F11Rik	RIKEN cDNA 5830432F11 gene	9		76029
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 66 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TCTCAAAAAA (3) TGTTTGGAGC (3) 11.4 0.0114 Cb medulloblastoma GACCAGAAAA (2) TCTCAAAAAA (3) TGTTTGGAGC (3) 18.4 0.0184 P8 GC+1d culture GACCAGAAAA (2) GAGGAAGAGG (3) GGGGGTGGCT (2) TCTCAAAAAA (3) TGTTAGGCTT (2) TGTTTGGAGC (3) 14.6 0.0146 P8 GC+SHH+1d culture GACCAGAAAA (2) GTGGACTCTG (2) TCTCAAAAAA (3) TGTTTGGAGC (3) 14.1 0.0141 E15 cortex GAGGAAGAGG (3) TGTTTGGAGC (3) 24.7 0.0247 P1 cortex CAGGGTGAGC (2) GAGGAAGAGG (3) 9 0.009 Hypothalamus CAGGGTGAGC (2) GTGGACTCTG (2) TCTCAAAAAA (3) TGTTTGGAGC (3) 14.4 0.0144 E12.5 retina CAGGGTGAGC (2) GAGGAAGAGG (3) TGTTTGGAGC (3) 13.2 0.0132 E14.5 retina GAGGAAGAGG (3) TCTCAAAAAA (3) TGTTTGGAGC (3) 10.9 0.0109 E16.5 retina GTGGACTCTG (2) TACACAATAT (2) TCTCAAAAAA (3) TGTTTGGAGC (3) 10.8 0.0108 E18.5 retina GACCAGAAAA (2) TCTCAAAAAA (3) TGTTTGGAGC (3) 10.9 0.0109 P0.5 retina CAGGGTGAGC (2) GAGGAAGAGG (3) TGTTAGGCTT (2) TGTTTGGAGC (3) 13.9 0.0139 P2.5 retina CAGGGTGAGC (2) GGGGGTGGCT (2) TACACAATAT (2) TCTCAAAAAA (3) TGTTTGGAGC (3) 10.7 0.0107 P4.5 retina CAGGGTGAGC (2) TCTCAAAAAA (3) TGTTTGGAGC (3) 8 0.008 P6.5 retina CAGGGTGAGC (2) GAATCCCAGC (6) TACACAATAT (2) TCTCAAAAAA (3) TGTTTGGAGC (3) 13.4 0.0134 P10.5 crx- retina GAGGAAGAGG (3) TACACAATAT (2) TGTTTGGAGC (3) 9.4 0.0094 P10.5 crx+ retina GAATCCCAGC (6) GGGGGTGGCT (2) TCTCAAAAAA (3) TGTTTGGAGC (3) 17.2 0.0172 Adult retinal TCTCAAAAAA (3) 7.4 0.0074 ONL GAATCCCAGC (6) GGGGGTGGCT (2) TCTCAAAAAA (3) TGTTAGGCTT (2) TGTTTGGAGC (3) 15.3 0.0153