Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.167971	Usp12	ubiquitin specific protease 12	5		22217
Gene Ontology	cysteine-type endopeptidase activity | cysteine-type peptidase activity | hydrolase activity | peptidase activity | protein modification | ubiquitin thiolesterase activity | ubiquitin-dependent protein catabolism
Human Homolog	USP12[ubiquitin specific protease 12]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 219 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAACCAAAA ACTTTTCAAA AGGCACAGTG (2) CCGAGTCAGC (2) CCGTGGGCAT GCCCAGTGTA GCCCCCGCAT (2) GCCTAATGTA GCGGGGGGGG (2) GCTTAATGTA (2) TACTGTCCTG 272.3 0.2723 Cb medulloblastoma AAAACCAAAA AATTCGTATG AGGCACAGTG (2) CCGTGGGCAT GCCCCCGCAT (2) GCCTAATGTA GCGGGGGGGG (2) GCTTAATGTA (2) GTTTAAAAAA (2) TACTGTCCTG TACTTTCCTG 106.1 0.1061 P8 GC+1d culture AAGAACTCAC ACTTTTCAAA AGGCACAGTG (2) ATGGCCGTAG CCGTGGGCAT GCCCCCCGCA (2) GCCCCCGCAT (2) GCCCCTGCAT GCCTAATGTA GCCTAGTGTA GCTTAATGTA (2) GGCCTAATGT TACTGTCCTG TGGGATAAAA 264.6 0.2646 P8 GC+SHH+1d culture AAGAACTCAC AATTCGTATG AGACTCTGTT (2) AGGCACAGTG (2) CCGTGGGCAT GCCCAGTGTA GCCCCCGCAT (2) GCCTAATGTA GCCTAGTGTA GTTTAAAAAA (2) TACTGTCCTG 242.7 0.2427 3T3 fibroblasts AGGCACAGTG (2) ATGGCCGTAG CCGAGTCAGC (2) CCGTGGGCAT GCCCCCCGCA (2) GCCTAATGTA GTCATAGCTG (2) 136.6 0.1366 E15 cortex ACTTTTCAAA CCGTGGGCAT GCCCCCGCAT (2) GCCTAATGTA GTCATAGCTG (2) 39.4 0.0394 P1 cortex ATGGCCGTAG CCGAGTCAGC (2) CCGTGGGCAT GCCCCCGCAT (2) GCCTAATGGA GCCTAATGTA 104.4 0.1044 Hypothalamus AAAACCAAAA AATTCGTATG ATGGCCGTAG CCGTGGGCAT CGAATCTACA CTGGGTGACA (2) GCCCCCGCAT (2) GCCTAATGGA GCCTAATGTA GGCCTAATGT TACTGTCCTG TACTTTCCTG 260.7 0.2607 E12.5 retina AAAACCAAAA AAGAACTCAC AATTCGTATG ACATTATACA ACTTTTCAAA ATGGCCGTAG CCGTGGGCAT CTGTCTGTGC (3) GCCCAGTGTA GCCCCCGCAT (2) GCCCCTGCAT GCCTAATGGA GCCTAATGTA GCGGGGGGGG (2) GCGTAATGTA GGCCTAATGT TACTGTCCTG 447.3 0.4473 E14.5 retina AAAACCAAAA AATTCGTATG ACATTATACA AGGCACAGTG (2) CCGTGGGCAT GCCCCTGCAT GCCTAATGGA GCCTAATGTA GCTTAATGTA (2) GTTTAAAAAA (2) TACTGTCCTG 344 0.344 E16.5 retina AAAACCAAAA AATTCGTATG ACATTATACA ACTTTTCAAA AGGCACAGTG (2) CCGAGTCAGC (2) CCGTGGGCAT CGAATCTACA CTGTCTGTGC (3) GCCCAGTGTA GCCCCCGCAT (2) GCCCCTGCAT GCCTAATGGA GCCTAATGTA GGCCTAATGT TACTGTCCTG 338.4 0.3384 E18.5 retina ACATTATACA AGACTCTGTT (2) CCGTGGGCAT CGAATCTACA GCCCAGTGTA GCCCCCGCAT (2) GCCTAATGGA GCCTAATGTA GTTTAAAAAA (2) TACTGTCCTG 310.9 0.3109 P0.5 retina AAAACCAAAA AATTCGTATG AGGCACAGTG (2) CCGTGGGCAT GCCCCCGCAT (2) GCCTAATGTA GCGTAATGTA GCTTAATGTA (2) GTCATAGCTG (2) 180.6 0.1806 P2.5 retina AAAACCAAAA AAGAACTCAC AATTCGTATG AGACTCTGTT (2) AGGCACAGTG (2) ATGGCCGTAG GCCCCCGCAT (2) GCCCCTGCAT GCCTAATGGA GCCTAATGTA GCCTAGTGTA GCTTAATGTA (2) GTCATAGCTG (2) GTTTAAAAAA (2) TACTGTCCTG 278.5 0.2785 P4.5 retina AATTCGTATG AGGCACAGTG (2) CCGTGGGCAT GCCCCCGCAT (2) GCCTAATGTA GCGTAATGTA GGCCTAATGT GTCATAGCTG (2) TACTGTCCTG TGGGATAAAA 289.3 0.2893 P6.5 retina AATTCGTATG ATGGCCGTAG CCGTGGGCAT GCCCAGTGTA GCCCCCGCAT (2) GCCTAATGGA GCCTAATGTA GCCTAGTGTA GCGGGGGGGG (2) GCTTAATGTA (2) GGCCTAATGT GTCATAGCTG (2) TACTGTCCTG TGGGATAAAA 213.7 0.2137 P10.5 crx- retina AAGAACTCAC AATTCGTATG ATGGCCGTAG CCGTGGGCAT CGAATCTACA GCCCAGTGTA GCCCCCGCAT (2) GCCTAATGTA GCTTAATGTA (2) 150.7 0.1507 P10.5 crx+ retina ACTTTTCAAA AGGCACAGTG (2) ATGGCCGTAG CTGGGTGACA (2) GCCCAGTGTA GCCCCCGCAT (2) GCCTAATGTA GCGGGGGGGG (2) GCTTAATGTA (2) GGCCTAATGT TACTTTCCTG 180.5 0.1805 Adult retinal AAAACCAAAA AATTCGTATG AGGCACAGTG (2) ATGGCCGTAG CTGGGTGACA (2) GCCCAGTGTA GCCCCCGCAT (2) GCCCCTGCAT GCCTAATGTA GCGTAATGTA GTCATAGCTG (2) TACTGTCCTG 111.6 0.1116 ONL AGACTCTGTT (2) ATGGCCGTAG CTGGGTGACA (2) GCCTAATGGA GCCTAATGTA GCGTAATGTA GTCATAGCTG (2) TACTGTCCTG 86 0.086