Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.173953	D19Mgi11	DNA Segment, Chr 19, Mouse Genome Informatics 11	19		107113
Mm.173953	Smc6l1	SMC6 structural maintenance of chromosomes 6-like 1 (yeast)	12	12 A2	67241
Human Homolog	SMC6L1[SMC6 structural maintenance of chromosomes 6-like 1 (yeast)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 51 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TACATATCTG (4) 1.6 0.0016 P8 Cb GC TGAGATGATA (3) 1.6 0.0016 Cb medulloblastoma AGCTCCCTTC (2) 2.3 0.0023 Cb medulloblastoma TACCACACAC (2) 2.3 0.0023 P8 GC+1d culture CGCCATTACT (3) 6.8 0.0068 P8 GC+1d culture TACATATCTG (4) 4.6 0.0046 P8 GC+1d culture TACCACACAC (2) 1.1 0.0011 P8 GC+SHH+1d culture CGCCATTACT (3) 3.5 0.0035 P8 GC+SHH+1d culture TACATATCTG (4) 2.3 0.0023 P8 GC+SHH+1d culture CTGCCACGTG (2) 1.2 0.0012 P8 GC+SHH+1d culture TGAGATGATA (3) 1.2 0.0012 3T3 fibroblasts CGCCATTACT (3) 7 0.007 3T3 fibroblasts CTGCCACGTG (2) 3.5 0.0035 3T3 fibroblasts TACCACACAC (2) 3.5 0.0035 3T3 fibroblasts TGCATTATGT (2) 3.5 0.0035 E15 cortex TACCACACAC (2) 4.9 0.0049 P1 cortex CGCCATTACT (3) 4.5 0.0045 P1 cortex TGCATTATGT (2) 4.5 0.0045 Hypothalamus CGCCATTACT (3) 5.4 0.0054 Hypothalamus TACCACACAC (2) 1.8 0.0018 Hypothalamus TGAGATGATA (3) 1.8 0.0018 E12.5 retina TACCACACAC (2) 3.8 0.0038 E12.5 retina CTGCCACGTG (2) 1.9 0.0019 E14.5 retina CAATCCCAAA (2) 1.8 0.0018 E14.5 retina CGCCATTACT (3) 1.8 0.0018 E14.5 retina TACATATCTG (4) 1.8 0.0018 E16.5 retina TACATATCTG (4) 5.4 0.0054 E16.5 retina TACCACACAC (2) 1.8 0.0018 E16.5 retina TGCATTATGT (2) 1.8 0.0018 E18.5 retina CGCCATTACT (3) 3.6 0.0036 E18.5 retina TACATATCTG (4) 3.6 0.0036 E18.5 retina TGCATTATGT (2) 3.6 0.0036 E18.5 retina AGCTCCCTTC (2) 1.8 0.0018 P0.5 retina CAATCCCAAA (2) 2 0.002 P0.5 retina CGCCATTACT (3) 2 0.002 P2.5 retina TACATATCTG (4) 5.3 0.0053 P2.5 retina TTAAAGAAAC (2) 1.8 0.0018 P4.5 retina TACATATCTG (4) 11.9 0.0119 P4.5 retina CGCCATTACT (3) 2 0.002 P4.5 retina TGCATTATGT (2) 2 0.002 P6.5 retina CGCCATTACT (3) 3.3 0.0033 P6.5 retina TACATATCTG (4) 3.3 0.0033 P6.5 retina AGCTCCCTTC (2) 1.7 0.0017 P6.5 retina TTAAAGAAAC (2) 1.7 0.0017 P10.5 crx- retina AGCTCCCTTC (2) 1.9 0.0019 P10.5 crx+ retina CGCCATTACT (3) 3.8 0.0038 Adult retinal CGCCATTACT (3) 9.3 0.0093 ONL CAATCCCAAA (2) 1.9 0.0019 ONL TGAGATGATA (3) 1.9 0.0019 ONL TGCATTATGT (2) 1.9 0.0019 ONL TTAAAGAAAC (2) 1.9 0.0019