Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.180458	Rpl13a	ribosomal protein L13a	7	7 69.0 cM	22121
Human Homolog	RPL13A[ribosomal protein L13a]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 106 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGGTCGGGTG 110.9 0.1109 P8 Cb GC AGCTGGGGTT 14.7 0.0147 P8 Cb GC CTGCCCCACA 6.5 0.0065 P8 Cb GC AGGCCGGGTG 1.6 0.0016 P8 Cb GC ATGTCGGGTG 1.6 0.0016 P8 Cb GC CGCCAGACGC 1.6 0.0016 Cb medulloblastoma AGGTCGGGTG 71.7 0.0717 Cb medulloblastoma AGCTGGGGTT 4.6 0.0046 Cb medulloblastoma AGGCCGGGTG 2.3 0.0023 Cb medulloblastoma CGCCAGACGC 2.3 0.0023 P8 GC+1d culture AGGTCGGGTG 119.9 0.1199 P8 GC+1d culture AGCTGGGGTT 24 0.024 P8 GC+1d culture AGGTCGGGCG 2.3 0.0023 P8 GC+1d culture AGGCCGGGTG 1.1 0.0011 P8 GC+SHH+1d culture AGGTCGGGTG 115.9 0.1159 P8 GC+SHH+1d culture AGCTGGGGTT 15.2 0.0152 P8 GC+SHH+1d culture CCTCGCACAG 2.3 0.0023 P8 GC+SHH+1d culture CGCCAGACGC 2.3 0.0023 P8 GC+SHH+1d culture AGGCAAACAG (2) 1.2 0.0012 P8 GC+SHH+1d culture CTGCCCCACA 1.2 0.0012 3T3 fibroblasts AGGTCGGGTG 290.9 0.2909 3T3 fibroblasts AGCTGGGGTT 24.5 0.0245 3T3 fibroblasts CCTCGCACAG 21 0.021 3T3 fibroblasts CTGCCCCACA 10.5 0.0105 3T3 fibroblasts CGCCAGACGC 7 0.007 3T3 fibroblasts ATGTCGGGTG 3.5 0.0035 E15 cortex AGGTCGGGTG 242.4 0.2424 E15 cortex AGCTGGGGTT 19.8 0.0198 E15 cortex CTGCCCCACA 9.9 0.0099 P1 cortex AGGTCGGGTG 50 0.05 P1 cortex AGCTGGGGTT 9.1 0.0091 P1 cortex AGGCAAACAG (2) 4.5 0.0045 P1 cortex CAGGTGGTGC (2) 4.5 0.0045 Hypothalamus AGGTCGGGTG 50.7 0.0507 Hypothalamus AGCTGGGGTT 5.4 0.0054 Hypothalamus CCTCGCACAG 3.6 0.0036 Hypothalamus AGGCAAACAG (2) 1.8 0.0018 Hypothalamus CAGGTGGTGC (2) 1.8 0.0018 Hypothalamus CGCCAGACGC 1.8 0.0018 Hypothalamus CTGCCCCACA 1.8 0.0018 Hypothalamus TGGTTGGGTG (2) 1.8 0.0018 E12.5 retina AGGTCGGGTG 189.6 0.1896 E12.5 retina AGCTGGGGTT 20.7 0.0207 E12.5 retina CCTCGCACAG 11.3 0.0113 E12.5 retina CAGGTGGTGC (2) 1.9 0.0019 E12.5 retina CGCCAGACGC 1.9 0.0019 E12.5 retina CTGCCCCACA 1.9 0.0019 E14.5 retina AGGTCGGGTG 58.3 0.0583 E14.5 retina AGCTGGGGTT 10.9 0.0109 E14.5 retina AGGCAAACAG (2) 5.5 0.0055 E14.5 retina CGCCAGACGC 5.5 0.0055 E14.5 retina CAGGTGGTGC (2) 3.6 0.0036 E14.5 retina CCTCGCACAG 1.8 0.0018 E14.5 retina TGGTTGGGTG (2) 1.8 0.0018 E16.5 retina AGGTCGGGTG 99.6 0.0996 E16.5 retina AGCTGGGGTT 9.1 0.0091 E16.5 retina AGGCAAACAG (2) 7.2 0.0072 E16.5 retina CGCCAGACGC 5.4 0.0054 E16.5 retina GGATGAATCA 3.6 0.0036 E16.5 retina AGGTCGGGCG 1.8 0.0018 E16.5 retina CCTCGCACAG 1.8 0.0018 E18.5 retina AGGTCGGGTG 74.6 0.0746 E18.5 retina AGCTGGGGTT 18.2 0.0182 E18.5 retina AGGCAAACAG (2) 3.6 0.0036 E18.5 retina CGCCAGACGC 3.6 0.0036 E18.5 retina CCTCGCACAG 1.8 0.0018 P0.5 retina AGGTCGGGTG 204.1 0.2041 P0.5 retina AGGCAAACAG (2) 9.8 0.0098 P0.5 retina AGCTGGGGTT 7.9 0.0079 P0.5 retina CCTCGCACAG 7.9 0.0079 P0.5 retina CGCCAGACGC 5.9 0.0059 P0.5 retina AGGTCGGGCG 3.9 0.0039 P0.5 retina GGATGAATCA 2 0.002 P2.5 retina AGGTCGGGTG 109.1 0.1091 P2.5 retina AGCTGGGGTT 8.8 0.0088 P2.5 retina CCTCGCACAG 3.5 0.0035 P4.5 retina AGGTCGGGTG 55.5 0.0555 P4.5 retina AGCTGGGGTT 5.9 0.0059 P4.5 retina CGCCAGACGC 4 0.004 P4.5 retina AGGCAAACAG (2) 2 0.002 P4.5 retina CCTCGCACAG 2 0.002 P6.5 retina AGGTCGGGTG 88.4 0.0884 P6.5 retina AGCTGGGGTT 6.7 0.0067 P6.5 retina CCTCGCACAG 3.3 0.0033 P6.5 retina CGCCAGACGC 3.3 0.0033 P6.5 retina AGGCCGGGTG 1.7 0.0017 P6.5 retina CAGGTGGTGC (2) 1.7 0.0017 P10.5 crx- retina AGGTCGGGTG 152.3 0.1523 P10.5 crx- retina AGCTGGGGTT 20.4 0.0204 P10.5 crx- retina AGGCAAACAG (2) 3.7 0.0037 P10.5 crx- retina CCTCGCACAG 1.9 0.0019 P10.5 crx- retina CTGCCCCACA 1.9 0.0019 P10.5 crx+ retina AGGTCGGGTG 103.8 0.1038 P10.5 crx+ retina AGCTGGGGTT 1.9 0.0019 P10.5 crx+ retina CCTCGCACAG 1.9 0.0019 P10.5 crx+ retina GGATGAATCA 1.9 0.0019 Adult retinal AGGTCGGGTG 96.3 0.0963 Adult retinal CCTCGCACAG 7.4 0.0074 Adult retinal AGCTGGGGTT 5.6 0.0056 Adult retinal ATGTCGGGTG 1.9 0.0019 Adult retinal CAGGTGGTGC (2) 1.9 0.0019 ONL AGGTCGGGTG 55.5 0.0555 ONL TGGTTGGGTG (2) 3.8 0.0038 ONL AGCTGGGGTT 1.9 0.0019 ONL AGGCAAACAG (2) 1.9 0.0019 ONL AGGCCGGGTG 1.9 0.0019