Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.1963	Srrm1	serine/arginine repetitive matrix 1	4		51796
Gene Ontology	nuclear matrix | nuclear mRNA splicing, via spliceosome | pre-mRNA splicing factor activity | protein binding | RNA binding | spliceosome complex
Human Homolog	SRRM1[serine/arginine repetitive matrix 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 46 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTTCTCCTTA 3.3 0.0033 P8 Cb GC GACCGCAGGG (2) 1.6 0.0016 Cb medulloblastoma GACCGCAGGG (2) 2.3 0.0023 Cb medulloblastoma GTGAACTTCA 2.3 0.0023 Cb medulloblastoma TTTCTCCTTA 2.3 0.0023 P8 GC+1d culture TTTCTCCTTA 4.6 0.0046 P8 GC+1d culture ACGGGAGCCA (2) 3.4 0.0034 P8 GC+1d culture GACCGCAGGG (2) 2.3 0.0023 P8 GC+1d culture TTTGTTATGT 1.1 0.0011 P8 GC+SHH+1d culture TTTCTCCTTA 3.5 0.0035 P8 GC+SHH+1d culture ACGGGAGCCA (2) 1.2 0.0012 3T3 fibroblasts GGAGAGCTGT (2) 14 0.014 3T3 fibroblasts ACGGGAGCCA (2) 3.5 0.0035 3T3 fibroblasts GTGAACTTCA 3.5 0.0035 E15 cortex GGAGAGCTGT (2) 4.9 0.0049 Hypothalamus TTTCTCCTTA 5.4 0.0054 E12.5 retina TTTCTCCTTA 5.6 0.0056 E12.5 retina ACGGGAGCCA (2) 1.9 0.0019 E12.5 retina GACCGCAGGG (2) 1.9 0.0019 E14.5 retina GTGAACTTCA 1.8 0.0018 E14.5 retina TTTCTCCTTA 1.8 0.0018 E16.5 retina TTTCTCCTTA 3.6 0.0036 E16.5 retina ACGGGAGCCA (2) 1.8 0.0018 E16.5 retina GGAGAGCTGT (2) 1.8 0.0018 E18.5 retina GACCGCAGGG (2) 1.8 0.0018 E18.5 retina GGAGAGCTGT (2) 1.8 0.0018 E18.5 retina GTGAACTTCA 1.8 0.0018 E18.5 retina TTTCTCCTTA 1.8 0.0018 P0.5 retina ACGGGAGCCA (2) 5.9 0.0059 P0.5 retina TTTCTCCTTA 5.9 0.0059 P0.5 retina TTTGTTATGT 2 0.002 P2.5 retina TTTCTCCTTA 12.3 0.0123 P2.5 retina ACGGGAGCCA (2) 8.8 0.0088 P2.5 retina GACCGCAGGG (2) 1.8 0.0018 P4.5 retina TTTCTCCTTA 7.9 0.0079 P6.5 retina TTTCTCCTTA 3.3 0.0033 P10.5 crx- retina TTTCTCCTTA 1.9 0.0019 P10.5 crx+ retina ACGGGAGCCA (2) 3.8 0.0038 P10.5 crx+ retina GTGAACTTCA 1.9 0.0019 Adult retinal TTTCTCCTTA 5.6 0.0056 Adult retinal ACGGGAGCCA (2) 3.7 0.0037 Adult retinal GACCGCAGGG (2) 1.9 0.0019 ONL TTTCTCCTTA 7.7 0.0077 ONL ACGGGAGCCA (2) 3.8 0.0038 ONL GACCGCAGGG (2) 1.9 0.0019 ONL TTTGTTATGT 1.9 0.0019