Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.209750
1110054H05Rik
RIKEN cDNA 1110054H05 gene
11
68837
Mm.209750
6230415M23Rik
RIKEN cDNA 6230415M23 gene
11
109037
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 40 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
ATGCGAGTGA
(
2
)
4.9
0.0049
P8 Cb GC
CTTGCCCAGG
(
2
)
3.3
0.0033
P8 Cb GC
TCAACACGCA
(
2
)
1.6
0.0016
Cb medulloblastoma
ATGCGAGTGA
(
2
)
4.6
0.0046
Cb medulloblastoma
AGGCCAGGGG
(
3
)
2.3
0.0023
Cb medulloblastoma
CTTGCCCAGG
(
2
)
2.3
0.0023
P8 GC+1d culture
ATGCGAGTGA
(
2
)
8
0.008
P8 GC+SHH+1d culture
ATGCGAGTGA
(
2
)
2.3
0.0023
P8 GC+SHH+1d culture
AACCCAGGTG
(
3
)
1.2
0.0012
P8 GC+SHH+1d culture
AGGCCAGGGG
(
3
)
1.2
0.0012
3T3 fibroblasts
ATGCGAGTGA
(
2
)
3.5
0.0035
3T3 fibroblasts
TCAACACGCA
(
2
)
3.5
0.0035
E15 cortex
ATGCGAGTGA
(
2
)
4.9
0.0049
P1 cortex
CTTGCCCAGG
(
2
)
4.5
0.0045
P1 cortex
TCAACACGCA
(
2
)
4.5
0.0045
Hypothalamus
AACCCAGGTG
(
3
)
1.8
0.0018
Hypothalamus
ATGCGAGTGA
(
2
)
1.8
0.0018
E12.5 retina
ATGCGAGTGA
(
2
)
9.4
0.0094
E12.5 retina
CTTGCCCAGG
(
2
)
1.9
0.0019
E12.5 retina
TCAACACGCA
(
2
)
1.9
0.0019
E14.5 retina
ATGCGAGTGA
(
2
)
5.5
0.0055
E14.5 retina
AACCCAGGTG
(
3
)
1.8
0.0018
E16.5 retina
ATGCGAGTGA
(
2
)
7.2
0.0072
E16.5 retina
AACCCAGGTG
(
3
)
1.8
0.0018
E18.5 retina
ATGCGAGTGA
(
2
)
14.6
0.0146
E18.5 retina
AGGCCAGGGG
(
3
)
1.8
0.0018
E18.5 retina
TCAACACGCA
(
2
)
1.8
0.0018
P0.5 retina
ATGCGAGTGA
(
2
)
3.9
0.0039
P0.5 retina
CTTGCCCAGG
(
2
)
2
0.002
P4.5 retina
ATGCGAGTGA
(
2
)
7.9
0.0079
P4.5 retina
CTTGCCCAGG
(
2
)
4
0.004
P6.5 retina
ATGCGAGTGA
(
2
)
3.3
0.0033
P6.5 retina
AACCCAGGTG
(
3
)
1.7
0.0017
P10.5 crx- retina
ATGCGAGTGA
(
2
)
1.9
0.0019
P10.5 crx+ retina
ATGCGAGTGA
(
2
)
3.8
0.0038
P10.5 crx+ retina
AGGCCAGGGG
(
3
)
1.9
0.0019
Adult retinal
AGGCCAGGGG
(
3
)
1.9
0.0019
Adult retinal
ATGCGAGTGA
(
2
)
1.9
0.0019
ONL
ATGCGAGTGA
(
2
)
5.7
0.0057
ONL
CTTGCCCAGG
(
2
)
1.9
0.0019
