Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.21740	Hnrph1	heterogeneous nuclear ribonucleoprotein H1	11		59013
Mm.21740	AI642080	expressed sequence AI642080	11		103805
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 183 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTTGTTAATT (4) 26.1 0.0261 P8 Cb GC AACTTAAAAA (12) 4.9 0.0049 P8 Cb GC CATCAACAGT (4) 3.3 0.0033 P8 Cb GC CTGTACATTT (3) 3.3 0.0033 P8 Cb GC TTTTTCAAAA (7) 3.3 0.0033 P8 Cb GC TTTTTGTAAA (7) 3.3 0.0033 P8 Cb GC AGCGGATATG (2) 1.6 0.0016 P8 Cb GC CAGCGGCCAG (2) 1.6 0.0016 P8 Cb GC CGGGGATTAC (2) 1.6 0.0016 P8 Cb GC GGCTTGTGTA (3) 1.6 0.0016 P8 Cb GC TTTGTTAAAT (9) 1.6 0.0016 Cb medulloblastoma AACTTAAAAA (12) 67.1 0.0671 Cb medulloblastoma TTTGTTAATT (4) 6.9 0.0069 Cb medulloblastoma CGGGGATTAC (2) 2.3 0.0023 Cb medulloblastoma GAACACTGTG (4) 2.3 0.0023 P8 GC+1d culture TTTGTTAATT (4) 37.7 0.0377 P8 GC+1d culture CTGTACATTT (3) 20.5 0.0205 P8 GC+1d culture AACTTAAAAA (12) 8 0.008 P8 GC+1d culture TTTTTGTAAA (7) 5.7 0.0057 P8 GC+1d culture CGGGGATTAC (2) 3.4 0.0034 P8 GC+1d culture CTTTTTTGTA (2) 2.3 0.0023 P8 GC+1d culture GAACACTGTG (4) 2.3 0.0023 P8 GC+1d culture TTTGTTAATC (3) 2.3 0.0023 P8 GC+1d culture TGTACACAGT (2) 1.1 0.0011 P8 GC+1d culture TTAGTTAGTT (4) 1.1 0.0011 P8 GC+1d culture TTTGTTAAAT (9) 1.1 0.0011 P8 GC+1d culture TTTTTCAAAA (7) 1.1 0.0011 P8 GC+SHH+1d culture CTGTACATTT (3) 17.6 0.0176 P8 GC+SHH+1d culture TTTGTTAATT (4) 17.6 0.0176 P8 GC+SHH+1d culture AACTTAAAAA (12) 5.9 0.0059 P8 GC+SHH+1d culture CGGGGATTAC (2) 5.9 0.0059 P8 GC+SHH+1d culture TTTGTTAATC (3) 3.5 0.0035 P8 GC+SHH+1d culture CAGCGGCCAG (2) 1.2 0.0012 P8 GC+SHH+1d culture CTTTTTTGTA (2) 1.2 0.0012 P8 GC+SHH+1d culture GAACACTGTG (4) 1.2 0.0012 P8 GC+SHH+1d culture TGTACACAGT (2) 1.2 0.0012 P8 GC+SHH+1d culture TTTTTCAAAA (7) 1.2 0.0012 3T3 fibroblasts GAACACTGTG (4) 3.5 0.0035 3T3 fibroblasts GGCTTGTGTA (3) 3.5 0.0035 E15 cortex CTGTACATTT (3) 4.9 0.0049 E15 cortex TTTGTTAATT (4) 4.9 0.0049 P1 cortex CTGTACATTT (3) 31.8 0.0318 P1 cortex TTTGTTAATT (4) 27.3 0.0273 P1 cortex AACTTAAAAA (12) 18.2 0.0182 P1 cortex TGTACACAGT (2) 9.1 0.0091 P1 cortex AAACTGACTA (2) 4.5 0.0045 P1 cortex TTAGTTAGTT (4) 4.5 0.0045 P1 cortex TTTTTGTAAA (7) 4.5 0.0045 Hypothalamus AACTTAAAAA (12) 12.7 0.0127 Hypothalamus TTTGTTAATT (4) 9.1 0.0091 Hypothalamus CAGCTCCCAA (6) 7.2 0.0072 Hypothalamus CGGGGATTAC (2) 1.8 0.0018 Hypothalamus TTAGTTAGTT (4) 1.8 0.0018 Hypothalamus TTTGTTAAAT (9) 1.8 0.0018 Hypothalamus TTTTTCAAAA (7) 1.8 0.0018 Hypothalamus TTTTTGTAAA (7) 1.8 0.0018 E12.5 retina TTTGTTAATT (4) 20.7 0.0207 E12.5 retina TTTTTGTAAA (7) 11.3 0.0113 E12.5 retina CGGGGATTAC (2) 5.6 0.0056 E12.5 retina GGCTTGTGTA (3) 5.6 0.0056 E12.5 retina GAACACTGTG (4) 3.8 0.0038 E12.5 retina AAACTGACTA (2) 1.9 0.0019 E12.5 retina CAGCGGCCAG (2) 1.9 0.0019 E12.5 retina TGTACACAGT (2) 1.9 0.0019 E14.5 retina TTTGTTAATT (4) 29.2 0.0292 E14.5 retina AACTTAAAAA (12) 9.1 0.0091 E14.5 retina CGGGGATTAC (2) 9.1 0.0091 E14.5 retina TTTTTGTAAA (7) 7.3 0.0073 E14.5 retina CATCAACAGT (4) 3.6 0.0036 E14.5 retina CTGCTCTGGC (3) 3.6 0.0036 E14.5 retina CAGCGGCCAG (2) 1.8 0.0018 E14.5 retina CTGTACATTT (3) 1.8 0.0018 E14.5 retina CTTTTTTGTA (2) 1.8 0.0018 E14.5 retina TTAGTTAGTT (4) 1.8 0.0018 E14.5 retina TTTGGCAGCA (6) 1.8 0.0018 E14.5 retina TTTTTCAAAA (7) 1.8 0.0018 E16.5 retina TTTGTTAATT (4) 16.3 0.0163 E16.5 retina AACTTAAAAA (12) 9.1 0.0091 E16.5 retina CTGTACATTT (3) 7.2 0.0072 E16.5 retina GGCTTGTGTA (3) 5.4 0.0054 E16.5 retina CAGCTCCCAA (6) 3.6 0.0036 E16.5 retina CTGCTCTGGC (3) 3.6 0.0036 E16.5 retina AGCGGATATG (2) 1.8 0.0018 E16.5 retina CAGCGGCCAG (2) 1.8 0.0018 E16.5 retina CATCAACAGT (4) 1.8 0.0018 E16.5 retina CGGGGATTAC (2) 1.8 0.0018 E16.5 retina CTTTTTTGTA (2) 1.8 0.0018 E16.5 retina TGTACACAGT (2) 1.8 0.0018 E16.5 retina TTTTTCAAAA (7) 1.8 0.0018 E16.5 retina TTTTTGTAAA (7) 1.8 0.0018 E18.5 retina CTGTACATTT (3) 9.1 0.0091 E18.5 retina TTTGTTAATT (4) 9.1 0.0091 E18.5 retina AACTTAAAAA (12) 5.5 0.0055 E18.5 retina CGGGGATTAC (2) 5.5 0.0055 E18.5 retina AAGATGTGTT (4) 3.6 0.0036 E18.5 retina GGCTTGTGTA (3) 3.6 0.0036 E18.5 retina TTTTTGTAAA (7) 3.6 0.0036 E18.5 retina CAGCTCCCAA (6) 1.8 0.0018 E18.5 retina CATCAACAGT (4) 1.8 0.0018 E18.5 retina CTTTTTTGTA (2) 1.8 0.0018 E18.5 retina TTTGGCAGCA (6) 1.8 0.0018 E18.5 retina TTTGTTAATC (3) 1.8 0.0018 E18.5 retina TTTTTCAAAA (7) 1.8 0.0018 P0.5 retina TTTGTTAATT (4) 15.7 0.0157 P0.5 retina CAGCTCCCAA (6) 5.9 0.0059 P0.5 retina CTGTACATTT (3) 5.9 0.0059 P0.5 retina AAACTGACTA (2) 3.9 0.0039 P0.5 retina GGCTTGTGTA (3) 3.9 0.0039 P0.5 retina TTAGTTAGTT (4) 3.9 0.0039 P0.5 retina TTTGTTAAAT (9) 3.9 0.0039 P0.5 retina AACTTAAAAA (12) 2 0.002 P0.5 retina CATCAACAGT (4) 2 0.002 P0.5 retina CTGCTCTGGC (3) 2 0.002 P0.5 retina CTGGGATGGC (5) 2 0.002 P0.5 retina TTTTTGTAAA (7) 2 0.002 P2.5 retina TTTGTTAATT (4) 37 0.037 P2.5 retina TTTTTGTAAA (7) 7 0.007 P2.5 retina CAGCTCCCAA (6) 5.3 0.0053 P2.5 retina CTGTACATTT (3) 5.3 0.0053 P2.5 retina CGGGGATTAC (2) 3.5 0.0035 P2.5 retina CTTTTTTGTA (2) 3.5 0.0035 P2.5 retina GGCTTGTGTA (3) 3.5 0.0035 P2.5 retina AACTTAAAAA (12) 1.8 0.0018 P2.5 retina AAGATGTGTT (4) 1.8 0.0018 P2.5 retina AGCGGATATG (2) 1.8 0.0018 P2.5 retina CATCAACAGT (4) 1.8 0.0018 P2.5 retina CTGGGATGGC (5) 1.8 0.0018 P2.5 retina GAACACTGTG (4) 1.8 0.0018 P2.5 retina GGTTTGTGTA (6) 1.8 0.0018 P2.5 retina TTTTTCAAAA (7) 1.8 0.0018 P4.5 retina TTTGTTAATT (4) 23.8 0.0238 P4.5 retina AACTTAAAAA (12) 9.9 0.0099 P4.5 retina CTGTACATTT (3) 9.9 0.0099 P4.5 retina TTTTTGTAAA (7) 9.9 0.0099 P4.5 retina GGCTTGTGTA (3) 4 0.004 P4.5 retina AAACTGACTA (2) 2 0.002 P4.5 retina CAGCGGCCAG (2) 2 0.002 P4.5 retina CAGCTCCCAA (6) 2 0.002 P4.5 retina CTGGGATGGC (5) 2 0.002 P4.5 retina CTTTTTTGTA (2) 2 0.002 P4.5 retina TGTACACAGT (2) 2 0.002 P6.5 retina TTTGTTAATT (4) 21.7 0.0217 P6.5 retina CTGTACATTT (3) 15 0.015 P6.5 retina AACTTAAAAA (12) 11.7 0.0117 P6.5 retina AGCGGATATG (2) 3.3 0.0033 P6.5 retina CAGCTCCCAA (6) 1.7 0.0017 P6.5 retina CGGGGATTAC (2) 1.7 0.0017 P6.5 retina CTGGGATGGC (5) 1.7 0.0017 P6.5 retina GGCTTGTGTA (3) 1.7 0.0017 P10.5 crx- retina TTTGTTAATT (4) 18.6 0.0186 P10.5 crx- retina CTGTACATTT (3) 16.7 0.0167 P10.5 crx- retina AACTTAAAAA (12) 13 0.013 P10.5 crx- retina CAGCTCCCAA (6) 11.1 0.0111 P10.5 crx- retina TTTTTGTAAA (7) 9.3 0.0093 P10.5 crx- retina GAACACTGTG (4) 3.7 0.0037 P10.5 crx- retina CATCAACAGT (4) 1.9 0.0019 P10.5 crx- retina CTGCTCTGGC (3) 1.9 0.0019 P10.5 crx- retina GGCTTGTGTA (3) 1.9 0.0019 P10.5 crx+ retina CTGTACATTT (3) 25 0.025 P10.5 crx+ retina CAGCTCCCAA (6) 11.5 0.0115 P10.5 crx+ retina TTTGTTAATT (4) 11.5 0.0115 P10.5 crx+ retina AACTTAAAAA (12) 7.7 0.0077 P10.5 crx+ retina TTTTTGTAAA (7) 3.8 0.0038 P10.5 crx+ retina CAGCGGCCAG (2) 1.9 0.0019 P10.5 crx+ retina CGGGGATTAC (2) 1.9 0.0019 P10.5 crx+ retina TGTACACAGT (2) 1.9 0.0019 P10.5 crx+ retina TTTGTTAAAT (9) 1.9 0.0019 Adult retinal CAGCTCCCAA (6) 16.7 0.0167 Adult retinal CTGTACATTT (3) 13 0.013 Adult retinal TTTGTTAATT (4) 9.3 0.0093 Adult retinal AACTTAAAAA (12) 3.7 0.0037 Adult retinal AGCGGATATG (2) 1.9 0.0019 Adult retinal GAACACTGTG (4) 1.9 0.0019 Adult retinal TGTACACAGT (2) 1.9 0.0019 ONL TTTGTTAATT (4) 15.3 0.0153 ONL CAGCTCCCAA (6) 9.6 0.0096 ONL CTGTACATTT (3) 3.8 0.0038 ONL GGTTTGTGTA (6) 3.8 0.0038 ONL TTTGGCAGCA (6) 3.8 0.0038 ONL TTTTTGTAAA (7) 3.8 0.0038 ONL AAGATGTGTT (4) 1.9 0.0019 ONL CGGGGATTAC (2) 1.9 0.0019 ONL CTTTTTTGTA (2) 1.9 0.0019